Gene AFE_2349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2349 
Symbol 
ID7136951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2093965 
End bp2095650 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content57% 
IMG OID643530714 
Productmultidrug resistance protein 
Protein accessionYP_002426741 
Protein GI218665752 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.306519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCGC AGGTCTTGCC AGACCGTGGC ACCCACCTTA TAGTGACCGA ACGGTCGGTA 
TCCGGGCGGG CGCATTCGTC GGACCGGCGT CGGTGTGCGC AAAGCGGATC GGTACTTGCA
GGACCATCCG CCCCAGAGAG GAGCCCATCC GTGGCGCAAG AGAGCCCGGC TTCACGTCTT
ACCATTACGG TCGCGGTCAT GCTGGCGGTA GTCATGCAGG TGCTAGACCT GACCATTGTC
AACGTGGCGT TGACCTACAT GCGCGGCTCC CTGCATGCCA ACAGCGATCA GATCACCTGG
GTGCTCACCA GTTACATGGT CGCCAATGTG ATCATCCTGC CCCTTACCGG GTTACTGGTG
GAACGCTATG GTCAACGCAC CATCATGCTT TGGAGTGTGG TCGGCTTTGT GATTTCTTCC
GTGCTCTGCG GGCAATCCCA TAGTCTGGTG GAAATCGTGC TCTGGCGTTT TCTGCAAGGC
ATTTTTGGTG CTTCTCTGGC CCCCGTAGGG CAAACCATCA TGCTCGGCGC CTACCCGTCC
GACAAGCGTG GTCAGGCTAT GGCCATTCTC GGCATGGGCA TCATGCTGGG TCCGATCCTG
GGCCCTACCC TGGGTGGCTA TCTGACGGAC ACGCTCAGTT GGCGCTGGGT GTTCTATGTG
AATATTCCCT TTGGTATCCT CGCGTTCCTG CTCATGCGGA CCATTCCCGA CGGCGGCAAG
AGCACCACTC CCCGTCCAGT GGACTGGACA GGCTTCACGC TGATGGCCGT AGGGCTGGGC
AGCCTGCAAG GCATGCTGAG CCTCGGTGAT CAGGATAACT GGTTCAGTTC GCGAACCATC
ATCATCCTGA CCATCTGCGC CATTTTGGGT ATGCTTTTTT TCGTCTGGCG CTCTCTGAGC
ACACCCTATC CCGTAGTGGA CTTGCGTCTG CTCAAAGACC GGAATCTGTC CATCGGTAGC
ATGGGGATCG GCATATTCGG TCTCGCCCTC TTCGGAACCA TGGTGATTCT GCCTATCATG
CTGGAGGGTC TGATGCGCTA TGAGGCATTT ACTGCGGGAC TGGTGATGGC ACCGCAGGGT
ATCGGTGCCA TGATCGCCAT GATGTTCGCG GGGCGCATGC TGGGACGTGG CGTCAATCCA
CGCAATATCG TGTTGGTGGG CATCGTTTTC GGAGCATTCG GCACTTATCT CACCACCCTC
TATAATCTGG ATATCAGCAT GGCCTGGGTA ATCTGGCCCA GTTTCATTCG CGGTATCGGT
TTTGGCCTGG TGACAATCCC GCTCTTCACC CTGGCTTTTA CGACCCTCGA AAAAGCCCAA
CAGGCGGAGG GCTCGGGCAT TTTCAACCTG ATGCGGACCT TGGGCGGAAG CATCGGTATC
GCCATCGTTT CGACGGTGAT GACTCAGGAA ACGCAGGTGG GCTGGAATCA AATGGGAGGG
CTCATCAACC CGTTCAATCC CGCTTTTCAC CGGTATCTTA CGGCAGCAGG CCTGACTCCG
GGGCCGACGA CTTGGCATCT GCTGGGTAAC GTCATCGTTT ATGACCAAGC GAACATGCGC
GGAACGCTGG ACGCCTTTAT GCTGGTTTTT TATGGCTTTC TGGTTTTGAT TCCGCTGATC
ATGTTCCTGA AGAGGCCACC CGGCAGCTCA GCAGGAGTGA CACAGGTAAC GCACTTCGGC
GAATGA
 
Protein sequence
MKPQVLPDRG THLIVTERSV SGRAHSSDRR RCAQSGSVLA GPSAPERSPS VAQESPASRL 
TITVAVMLAV VMQVLDLTIV NVALTYMRGS LHANSDQITW VLTSYMVANV IILPLTGLLV
ERYGQRTIML WSVVGFVISS VLCGQSHSLV EIVLWRFLQG IFGASLAPVG QTIMLGAYPS
DKRGQAMAIL GMGIMLGPIL GPTLGGYLTD TLSWRWVFYV NIPFGILAFL LMRTIPDGGK
STTPRPVDWT GFTLMAVGLG SLQGMLSLGD QDNWFSSRTI IILTICAILG MLFFVWRSLS
TPYPVVDLRL LKDRNLSIGS MGIGIFGLAL FGTMVILPIM LEGLMRYEAF TAGLVMAPQG
IGAMIAMMFA GRMLGRGVNP RNIVLVGIVF GAFGTYLTTL YNLDISMAWV IWPSFIRGIG
FGLVTIPLFT LAFTTLEKAQ QAEGSGIFNL MRTLGGSIGI AIVSTVMTQE TQVGWNQMGG
LINPFNPAFH RYLTAAGLTP GPTTWHLLGN VIVYDQANMR GTLDAFMLVF YGFLVLIPLI
MFLKRPPGSS AGVTQVTHFG E