Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2302 |
Symbol | |
ID | 7134099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2051024 |
End bp | 2053240 |
Gene Length | 2217 bp |
Protein Length | 738 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643530668 |
Product | TonB-dependent receptor |
Protein accession | YP_002426698 |
Protein GI | 218666361 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACA TCGTGACACC ACGCGCCATC GTCAAGGCCA TCCTGGCCGC CACCTTCATC GGCCCCGTTC CGGCCCTTGC CGATGATCCG GTCAAAACCG ACGATATTTC GGTATTCGGC CAGAAGGAAA CGCGGCAGGT CCTGACCATG ACCCGTTCGG AACTCAGTGA GGCCCCGCCG GGATATAGCC CCCTGGCCTC CCTGCAGAAG CTGCCCGGCG TATTCTTTTC CTCATCAGAC CCCCTCGGCA ACTACGAATG GGGCAGCCGC TTCAGTATCC GGGGTTTCAA CCAGAACCAG CTCGGTTTCA CGCTGGATGG ATTACCATTG GGCGATCAGA GCTACAGCAA CAACAACGGC CTTTCCATCG GGCGCGCCAT CAGCCAGGAA AACATCAGCC GGGTCAGCGT ATCCGAAGGG GCCAGCGATA CCGGCACGGC ATCCACCAGC AACCTGGGCG GCAGCGTTCA GTTCTTTTCC GTCGATCCCA AGAATCGCTT CGGCGTGACC CTGGCCGAGA CCTATGGCAG CGCCAACTCC AGCCGCACCT TTCTGCGCCT GGATACCGGC GACTTGGGTG CCCATACCAA GGCCTTCGTC AGCCTCCTCT ATAGCCGCGC CGACAAATGG AAAGGCTATG GCCCGCAAAG CGAAAAACAA CTCAACGCCA AGATCGTACA CTTCTTCGGT GAGAGCAAGA TCACGGCTTT TGTCGATCTA TCCCGCCGTG ATGAAAGCGA CTACGCCGAT CTCTCCCTCG ACTCCCAGCG GCGCCTGGGC TGGAACTGGG ACAATTATGC CCCGGATTTT CAGCGCGCCG CCAACGCCGC CAAAGGTATC TTTACCGGCG GCGTGACCAG CGTTGACGAT GCCTATTATT TCGCCCGAGG CCTGCGCAAC GACGAACTGG CTTATATGAA CGCCAATCTC AAGCTCTCCG CCATAGCCCG TCTCGATACC ACCGTCTATT ATCACCACAA TGATGGGCAA GGGCATTGGT ATACCCCTTA TGTGCCCTCC CCATCGGGCC TGCCCATATC CATCCGCACC ACGGAATATG GCATCAGCCG GGGCGGCGTC ATCTCTTCGC TGGTGGCGCG GCTCCACCAT CACCGACTCA GCACCGGATT CTGGTATGAA TACAATAAAC ATCAGCTTAC CCGGAATTAC TACAATATCA CCTCCGGTGA CATCAATGCC TACGATCATT TTCTCAGCAA CCCCATTGCC ACGGCTTTCT TGCAGCAGTT CGACACCACT ACCTGGCAAT TCTTCGCCCA GGATCAGGCC ACCTTCTTCA ATGACCGGCT AAAAGTAACC CTGGGCGTCA AAAGCCCCCA TGTGAACATT GATGCCAACT CCCTGGTGGG CAATCTCGCC GCCGGTTCCA TCAGCGCTCA GCGCGGCCTC CTGCCGCAGG TGGGCCTGAA TTACCAGCTC ACCCCGGCGG AGAATGTTTT CTTCTCCTAC GCCCAGAACA TGCGCGCCTT TCAGCCGGGC ATTAGTGGAC CGTTCTCCAC CACGCAGGCC GCTTTCAACG CCACCTCCGG CAGCCTAAAA CCGGAAACTT CCCAGACCGT GGATATCGGC ATCAAGACCC AGCGGGGCAA TTTCCAGGCG TCGCTGGATG CGTATCTGGT CAACTTTGAT AACCGCTTGC TGAGCATCTC CCAGTGTGTG GGCATTCTCG GCTGCCCCTC CACCCTGGCC AACGTAGGCT CCGTGCATAC CCGCGGCGTG GAAGGCGCCT TTCAATGGTC GCCCGTCCAG GATGTCACCT GGTACAATTC CTTGACTTAT ACCTCTTCCA AGTACCAGTC CGACTATCTG GACGGCACGA CCCTGGTACG GGCCGCGGGT AAAAATGTCG TGGATGCCCC GCGCCTGATG TTTGCCACCC AGCTTGCCTA TGAACACGCC GGTTTCTTCG GCCGCCTCGG TGCAAAATAT ACGGGTGAGC GCTATTACAC CTACACCAAT GACGCCAAAG TGCCGGGCTA CTGGCTGACA GACCTCAGCA CCGGCTACCG CCTGCGCCGC GTCCTCGGAC TCCAGGAACT GCGCTTCCAG CTGAACGTCA CCAACCTCCT CAACGAAAAC TACTGGGCCA CCATCGGTAC CAACGGCTTT GTCTCCTCGG ATCCGCAGGG ACAGTTCTGG ACCCTGCAAA ACGGCGCGCC ACGCCAGGTC TTCGGTACGG TGAGCGGCAC CTTCTGA
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Protein sequence | MKHIVTPRAI VKAILAATFI GPVPALADDP VKTDDISVFG QKETRQVLTM TRSELSEAPP GYSPLASLQK LPGVFFSSSD PLGNYEWGSR FSIRGFNQNQ LGFTLDGLPL GDQSYSNNNG LSIGRAISQE NISRVSVSEG ASDTGTASTS NLGGSVQFFS VDPKNRFGVT LAETYGSANS SRTFLRLDTG DLGAHTKAFV SLLYSRADKW KGYGPQSEKQ LNAKIVHFFG ESKITAFVDL SRRDESDYAD LSLDSQRRLG WNWDNYAPDF QRAANAAKGI FTGGVTSVDD AYYFARGLRN DELAYMNANL KLSAIARLDT TVYYHHNDGQ GHWYTPYVPS PSGLPISIRT TEYGISRGGV ISSLVARLHH HRLSTGFWYE YNKHQLTRNY YNITSGDINA YDHFLSNPIA TAFLQQFDTT TWQFFAQDQA TFFNDRLKVT LGVKSPHVNI DANSLVGNLA AGSISAQRGL LPQVGLNYQL TPAENVFFSY AQNMRAFQPG ISGPFSTTQA AFNATSGSLK PETSQTVDIG IKTQRGNFQA SLDAYLVNFD NRLLSISQCV GILGCPSTLA NVGSVHTRGV EGAFQWSPVQ DVTWYNSLTY TSSKYQSDYL DGTTLVRAAG KNVVDAPRLM FATQLAYEHA GFFGRLGAKY TGERYYTYTN DAKVPGYWLT DLSTGYRLRR VLGLQELRFQ LNVTNLLNEN YWATIGTNGF VSSDPQGQFW TLQNGAPRQV FGTVSGTF
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