Gene AFE_2300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2300 
Symbol 
ID7134805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2049895 
End bp2050269 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content66% 
IMG OID643530666 
Productbiopolymer transport protein, ExbD/TolR family 
Protein accessionYP_002426696 
Protein GI218667131 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.562465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAAGG GGCGGGTAGA GATCATCCCC ATGATCGACA TCATGCTCTT CCTGCTGATC 
TTCTTCATCA TGGTGACGAT CCACATGATC CCCACCCAGG GGCTGCCCGC GCAGATGCCC
GGTTCCAGCA CCGCCCGCGA TCTGCCCAAG CCCAAGGTCG TCCTCACCCT GCGCCAGTCC
GGTGCAGTAG AGACGGACGG CCACACCATC AGCCTGCCGG ATCTGGAAGC CAGGCTCCGC
CAGGGCGATC CCGCCGAGAC CCAGGTCACC ATCGCCGCCG ACAAGGGCGC CGACATCCAG
GCTCTGGTCA AGGTCATGGA CGCCTGCCGC CACGCCGGCG TCAGCGCCAT CGGCCTGGCG
GCCAAGCCGG AGTAG
 
Protein sequence
MRKGRVEIIP MIDIMLFLLI FFIMVTIHMI PTQGLPAQMP GSSTARDLPK PKVVLTLRQS 
GAVETDGHTI SLPDLEARLR QGDPAETQVT IAADKGADIQ ALVKVMDACR HAGVSAIGLA
AKPE