Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2287 |
Symbol | |
ID | 7136702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2037621 |
End bp | 2038373 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643530655 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002426685 |
Protein GI | 218666148 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | [TIGR02325] phosphonates metabolism transcriptional regulator PhnF |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATA TCACCAAAGT ACCTTACGCA CCCGGCATCA CTGTCTGGAA GCAGATCGTC GATGACATCC AGCAGCGGAT GGACAGAGGC GAGGTGCGGC CCGGCGAGAA ACTACCCAGC GAAGGGGCTC TGGCATCGAC CTACGGCGTT AACCGGCATA CGATTCGGCG GGCACTGCAG GAACTCGCCG CTCTTGGAAG ACTGCATATT GCCCATGGCC GCGGTTCTTT TGTAGCGTCT ACCGTCTTTG ATTACCAGCT GGAAGAACGC CCGAGATTCT CTGAATGGAT CAAGAAGTAC AACCGGCCAG GTTCTTCGGA GGTGTTGGAA GCAGCCATCA TACCCCTGCA GGATCTACCC GAATTACCGC GTATCCTCAA CTACGGAGTG TTTCCCGATT ATCCAAACGT GGCAATGGTT GAAACGCTGG GCAAACTTGG TGAGCATCCC GTATCCATCG CGCGGCACCT GTTTTTTGGT GAACGCCTGT TGACCTTGGT GGATGATCTG AAACAGGGGC TGGGGATCAC GGTATCGCTG AAAAAAATGG GCGTGAATGA TTACACCCGA CTGAGGTCCT CCGTCTCAGC CGAGTTGCCC AAAGCCAGGG AACGTCGGTT ACTCGCCATA GATAAATTCG ATCCCGTTTT TATCTGCGAG AACGTGAACA TCGACCCGGA AGGTGTGGGA ATAGAGTTCT CAACGGTGAT CTATCCTGCT TCCCGGGTGC GACTGGTGTA CGAACCGGAG TGA
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Protein sequence | MTDITKVPYA PGITVWKQIV DDIQQRMDRG EVRPGEKLPS EGALASTYGV NRHTIRRALQ ELAALGRLHI AHGRGSFVAS TVFDYQLEER PRFSEWIKKY NRPGSSEVLE AAIIPLQDLP ELPRILNYGV FPDYPNVAMV ETLGKLGEHP VSIARHLFFG ERLLTLVDDL KQGLGITVSL KKMGVNDYTR LRSSVSAELP KARERRLLAI DKFDPVFICE NVNIDPEGVG IEFSTVIYPA SRVRLVYEPE
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