Gene AFE_2270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2270 
Symbol 
ID7135664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2021592 
End bp2022275 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content57% 
IMG OID643530638 
ProductMotA/TolQ/ExbB proton channel family protein 
Protein accessionYP_002426668 
Protein GI218666202 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.329351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTGC AATATCTCAT TCACCTCGCC AACTATTCAG ATGGCGTTCT CTACGTGCTT 
GGCGCGCTGT TATTGGTCGA ACTGTCCGTT ATCGTGGACC GGTTCTGGTT TTTGCGGCGC
ACCATCCTGC GTGGACTGAT CTTTGTGCAT GAACTGGGTA GCCATGGTCG CCTGGATCGT
GACACACTGA ATCAGATGGC TGATGGGGCG AGTGATCTGC CCGAAGCCGC GCTGCTGCGT
ATGGCTGCCT CCCATCATGG GCAGGTGAAA GGCGAAGGCC TTGCCAGTCG TCTCGAAGAA
AGCGTGCTGG TGTTGGCGCC GCAACTGGAT CGCCGTCTGT GGTTGCTCGA CACTATCATC
ACCTTGGCGC CGCTGCTGGG TTTGTTCGGC ACGATTATCG GTATGTTCCA CGCTTTTTCA
GTGCTGGCCA CTCCGGGACA TGCGCCTACG GCGGTCACCG GCGGTGTGGC TGACGCGCTG
GTCGCCACGG CAACTGGGCT GTTCATCGCC ATGCTCGGTC TGATGGCTTT CAATGCCTTC
AACAATCAGG TGCGGCAGAT TCTCCTGCAA CTGGATTCCG TAAAGACCAT GCTGCTCAAT
CGGATGGACG GTCAACCCAT GATCACCCCG GACAACAGTG ACAAGCAACG CAGTGAAATG
TTGTCCGTGG CGAGGGCCAG CTGA
 
Protein sequence
MNLQYLIHLA NYSDGVLYVL GALLLVELSV IVDRFWFLRR TILRGLIFVH ELGSHGRLDR 
DTLNQMADGA SDLPEAALLR MAASHHGQVK GEGLASRLEE SVLVLAPQLD RRLWLLDTII
TLAPLLGLFG TIIGMFHAFS VLATPGHAPT AVTGGVADAL VATATGLFIA MLGLMAFNAF
NNQVRQILLQ LDSVKTMLLN RMDGQPMITP DNSDKQRSEM LSVARAS