Gene AFE_2264 details

Gene Information

• Locus tag: AFE_2264
• Symbol: pyrD
• ID: 7134338
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 2016556
• End bp: 2017647
• Gene Length: 1092 bp
• Protein Length: 363 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643530632
• Product: dihydroorotate dehydrogenase
• Protein accession: YP_002426662
• Protein GI: 218665995
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0167] Dihydroorotate dehydrogenase
• TIGRFAM ID: [TIGR01036] dihydroorotate dehydrogenase, subfamily 2

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.125418
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTACG GCCTGCTGCG CCCTCTGCTT TTTACGCTGG ACCCGGAGCG CGCCCACACC 
CTGAGTATCG CGGCGCTGGA AGCACTGGGA CACATGCCAC GTGGCCTCGC CCGTGTGGCC 
CGGCGCTACA CCGCCCACGA CCCGCGTCTG GCGCAGGACT TTTGGGGCCT GCATTTTGCC 
AATCCCGTCG GCCTCGCCGC CGGCTATGAC AAGGATGCCC GCGCCACCGC CGCGCTCCCC 
GCTCTCGGCT TCGGCTTCAT CGAAATCGGC ACAGTGACCC CGCGCCCGCA GCCTGGTAAT 
CCGCGCCCCC GGGTCTTTCG TTATCCGGCG CAGCAGGCGG TCATCAACCG CATGGGTTTC 
CCCGGTGAAG GGGCTGCGGC GGTTGCCCGA AGACTGGCAG CATTACCTGG CCATCCGGTG 
CCTATCGGCA TCAATCTCGG CAAAAACAAG GACACCCCGC TGGAGCGGGC GCAGGACGAC 
TATGTCGCCG CGCTGGAGTT GCTCTTTCAC TATGGCGACT ATCTCTGCAT CAATGTCAGT 
TCACCCAACA CGCCGGGTTT GCGCTTGCTG CAGGGTGAAG AAGCCTTACG GGGACTGCTC 
AAGGCCGTCG CCGCAGCCAA CCAGCGTCTG GCCCTACAGC ATCAGCGCCC GCCCCTGCCT 
CTGCTCCTCA AGATCGCACC GGATCTGGAC AACGATGATC TCAACGCCAT CGGTAGTCTG 
GCCTTAGGCA CGGCACCTCT GGTGAATGGT TTCATCGCCA CCAATACCAC CATAGAACGC 
CCGGCCTCTC AACCCGGACT CTCCGAAAGC GGGGGCCTGA GCGGTGCACC ATTGCTGCAG 
CAATCCAATG CCGTCATCGC GCAACTCTAT CGTGCGACCC AGGGACAGGT GCCCATCATT 
GGCGTCGGCG GCATTCTGAG CGCGGCAGAC GCTTATGCCA AAATTCTGGC CGGGGCCAGC 
CTGGTACAAG TCTACAGCGG CCTGATTTTC CGCGGACCCG GGCTGGTACG GGAGATTCTG 
GAAGAACTGC CGGGGCTTTG GTTAAAGGAT GGTTATCCCG ATCTTGCTCA TGCGCGGGGT 
AGTACCGCCT GA 

 

Protein sequence

MSYGLLRPLL FTLDPERAHT LSIAALEALG HMPRGLARVA RRYTAHDPRL AQDFWGLHFA 
NPVGLAAGYD KDARATAALP ALGFGFIEIG TVTPRPQPGN PRPRVFRYPA QQAVINRMGF 
PGEGAAAVAR RLAALPGHPV PIGINLGKNK DTPLERAQDD YVAALELLFH YGDYLCINVS 
SPNTPGLRLL QGEEALRGLL KAVAAANQRL ALQHQRPPLP LLLKIAPDLD NDDLNAIGSL 
ALGTAPLVNG FIATNTTIER PASQPGLSES GGLSGAPLLQ QSNAVIAQLY RATQGQVPII 
GVGGILSAAD AYAKILAGAS LVQVYSGLIF RGPGLVREIL EELPGLWLKD GYPDLAHARG 
STA