| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2254 |
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| Symbol | |
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| ID | 7134705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 2006126 |
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| End bp | 2008192 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643530622 |
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| Product | penicillin-binding protein 1C, putative |
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| Protein accession | YP_002426652 |
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| Protein GI | 218667740 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.531479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGGC GATGGTCTGG CTGGCTGGTG TGCGGTTTGG CTCAGGGCGG GGCCTGGTTC
TGGCCCAGGG GCAGGCACCG CTGGTGGCAG CGTGCCTGGC GCTGGCTGCT GACCGGTCTC
GTCGTGCTGG CTATCACAGC CTGGTTTATG CCACCCGGCG CCGGGACCCT GGCACAGGAA
GGCCGCATTA TCTACGACCG TCACGGCCAT GTGCTGGCCC TGTTCCTCAA TAAACAGCAA
CAGTGGGCCT TCACTACCGC TCCGCACCGA GTCAGCCCGG TGATGCGGCA GATGCTGGTG
GCCATCGAGG ATCGGCATTT CTCCTGGGAT CCCGGCATCG ACCCTCTCGC CATTCTTCGC
GCCGTGGGAC AGATGGTTCT GGCGGGTCAC GTCGTATCCG GCGCCTCTAC CATCACCATG
CAGGTAACAC GGATGTTACG TCCCCAGCCC CGCACCCTGC CCGTGAAGAT GCTGGAAGCC
ATGCAGGCCA TTTCCCTCTT CGAACACCAT TCCAAATCCG CTGTGCTGGG CATGTGGCTA
TCTCTGGCCC CGGAGGGTGG CAATATCGAG GGGATCGAGG CCGCCGCCCA TGCCTGGTTC
CACCAGTCAC CACGCACCTT GGGACCGGCA CAGGCGGCTT TTCTGGTGAT GATGGTGCGC
AACCCCAACC AGCTCAATCC GCTGATTCAT CCGCGGGGTG CCCTCGCCAC CCGCAACCAG
ATCCTGCGGG AATCCCGGCG GCAAGGCGTC ATTTCCCAGG CAGAGCTGGA GCGCGCGCTG
GCCACCCCCT TGCCCCATCG TCTCTACCCC ATGCCGCTGC TCTCGCCCCA GGCGGTTTCG
GTGCTGCCCA GCGGCACCCG CACCACCCTG GATGCGCCCA TGGATCGTGC CATCGCCGTC
ATCGCCCGAC AGGCGCTTCG CCATATGGAG CCGACGGAGA GCATCGCCAT CGTGGTAGTT
AGCCTCAAGA CCAAAGGTAT CCGCGCCGTT TACAGTGGTG ACTGGGGCAA TGCGCAGCGC
CATGGCTTCA TCGACATGAC CCGAGCCATA CGCTCGCCGG GGTCTGCTCT CAAGCCTTTC
CTCTACGGAC TCGGCTTTGA AGCGGGACTG ATCCGTCCGA CTACCAATGT GGCCGACTTC
CCCAGCAACT TCGGGGCTTA TGAACCCAAT GATTACAATG ACACCTACAT GGGGATCGTG
ACGGCGACCA CCGCGCTGCG GCGCTCCCTG AATGTGCCCG CCATCGACCT CATCGAAGCC
TATGGGCCTT TGCGCTTTGC GGCACACCTG ACGGCCGCGG GCACGCCGGT GACGTTACCT
TATGGGGCCA ACCCGGCCTT GCCCTTGGCC TTGGGCGGCG CCGGCATTTC CATGCGGCGG
CTGGTGGCGC TCTATGCCGG GCTGGCGAAT GGCGGGGTGG TGGAGCGCCT GCATCTGATC
GCCGGCCAGC GTCGCAGACA ACGCCGCCTG CTCTCCCCCC ATGCGGCAGA GGAGGTCACC
GCCATCCTCA ACCGTCCCTT TCCCTTCGGC GGTCCCACCG GCATCGCCTG GAAAACCGGT
ACCAGCGCCG GCAACCGCGA CGACTGGGCC ATAGGCTTCA ATCACCGCTA CGCCGCCGCC
GTCTGGATCG GTCAGCCCAA CGGCGCTGCC CTGCCCGGTG ATACCGCCCT TGCCGCCATT
CCGATTCTCG CCAAGGTCTT CAGCATCCTG CCGGGCCGCG CCCTGTCGGT GCACCCGCCC
ACCCGGCCAC TGACCCTGCA GCGCCTGCCC ATGGGTACCC TGCTGGAGAT CGCCGCACCC
GCACCGGGCG CACAACTGAC CGCCGGTGAG CCGGTCAGTA TTCGCGTGCT CGGCGGCAGC
CGACCTTTTC ATTTTCTGGT GGATGGTCGC CCCATTCCGT CCGACCCGGC CTTGAGAAGC
GTGCGCTGGA CACCCTCTGT GGCGGGTTTC TATCATCTCA GCATTCTCGA CGCCAACGGC
AAACTGGTGA AGCGGGCATT GCGGGCAGTA CCACCGATCA GCGCGGGAAA TGTGGAGTGG
GGTGGCACTA CCACTGCGCA GAAGTAA
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| Protein sequence | MTGRWSGWLV CGLAQGGAWF WPRGRHRWWQ RAWRWLLTGL VVLAITAWFM PPGAGTLAQE
GRIIYDRHGH VLALFLNKQQ QWAFTTAPHR VSPVMRQMLV AIEDRHFSWD PGIDPLAILR
AVGQMVLAGH VVSGASTITM QVTRMLRPQP RTLPVKMLEA MQAISLFEHH SKSAVLGMWL
SLAPEGGNIE GIEAAAHAWF HQSPRTLGPA QAAFLVMMVR NPNQLNPLIH PRGALATRNQ
ILRESRRQGV ISQAELERAL ATPLPHRLYP MPLLSPQAVS VLPSGTRTTL DAPMDRAIAV
IARQALRHME PTESIAIVVV SLKTKGIRAV YSGDWGNAQR HGFIDMTRAI RSPGSALKPF
LYGLGFEAGL IRPTTNVADF PSNFGAYEPN DYNDTYMGIV TATTALRRSL NVPAIDLIEA
YGPLRFAAHL TAAGTPVTLP YGANPALPLA LGGAGISMRR LVALYAGLAN GGVVERLHLI
AGQRRRQRRL LSPHAAEEVT AILNRPFPFG GPTGIAWKTG TSAGNRDDWA IGFNHRYAAA
VWIGQPNGAA LPGDTALAAI PILAKVFSIL PGRALSVHPP TRPLTLQRLP MGTLLEIAAP
APGAQLTAGE PVSIRVLGGS RPFHFLVDGR PIPSDPALRS VRWTPSVAGF YHLSILDANG
KLVKRALRAV PPISAGNVEW GGTTTAQK
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