| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2253 |
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| Symbol | |
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| ID | 7136551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 2001409 |
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| End bp | 2006118 |
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| Gene Length | 4710 bp |
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| Protein Length | 1569 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643530621 |
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| Product | hypothetical protein |
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| Protein accession | YP_002426651 |
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| Protein GI | 218667157 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGGAAG CCATGTACCG CACTTATCCC GCGGATGCGC GGATTGCCGC CGATTTGAAA
AAAACGGTCA TGACCTATGG CTTCCAGGTG CAAAGTGTGA CCCCGGATGC CAACCAGTTC
CCAACCCGCA CCTGCGTGAA GTTTACCGCC CCGCTCTCCG AGGCACCGGA TTTTCATGCC
AGTAACTGGG TAACCTTTTC CCCCGTCCGG CCCCATGCGG CGGTGGTCCG TGAGAACGGC
GGCATCTGCG TCACCGGTCT GCCTGCGGGC AGCAGCACGC AGACGCATAT CCGGGCAGGC
CTGCCCGCCA TTGCCGGAGC GGTCATGACG GCGGCGAAAA GCATTACGTT GACCCTGCCC
AATCGCTCAC CAAGCATCAT CTCCGATACC GGCCGCTTTA TCATTCCGGC ATCACTGCCA
CCGGCGGTAG GTTTTTCCAG CGTCAATATT TCACGGGTCA AACTGCAGAT CAATCGGGTG
CCGGAACGCG CCCTGCTGGC TTTCGTCGCC AATCACCCGT TGCTGAATCA GGACAGCGAC
GAATCCACCC TGAACAACCA GAACAGCCTG ACGGTCTGGC GCGGAACGGC AGACATCCCG
CATTTCACGC AGAACCAGTT GATGCACACG ATATTGCCCC TGCCCAAAAT CCTTCAGAAG
CCGGGGCTCT ACGCGATCCA GATCGGCCCC GGAGACGGCA CGCCCAATGC CAACGGCAGC
CTCAACACCG TGCAACTGGT GTTGCGCACC AACCTGGCAC CGACAGTCTG GCAGGGGCGT
AATGGCTTGT ATGTGCAGAT GCGCCGTTAT ACCGACGCCA GCCCCTGGAG CGGCGTCAAA
GTCGAACTCA TCGCCCAGGA CAACGATATC CTGCAAACGG TGCGGACCAA CAGCGACGGC
ATCGCCGTCT TTCCGAAACC CATCCTGCAG GGCAGCGGCG GACAGAGTCC AGCGGCGCTG
CATATTTATG GTCCCGGTAA CGAGTTCACC CTCTTTAACC TGCAGGGATC GCCGCTGAAT
CTGTCCGGAC GCGGCATCTC CGGGCGAACG GCCCTGAAAC CGGTCAGCCC TTTCCTGTGG
CTGGACCGCG GTATTTATCG TCCCGGCGAG ACGGTGCATG TGGCGGCCCT TTATCGCAGT
GCTGCCGGCA GACCGCTGGA CTTGCCTTTG CACCTCATCG TCCGCCGGCC CGGCGGGCAG
GTTTTCCTGG ACACTGTCCC CAAACTGTCT GACGACGACG CCATCGCCGT GCCCGTCAAA
CTGCCCTTGG CGGCGCAGGA TGGTAACTGG AGCGTGAGCC TGGCCACCGG CGTACGTGAG
TCCGCTCTGG CGAAGGAGAC CTTTACGGTA TCCGCCTTTG TACCGCCGAC CCTGGCCGTC
GAGCTAGGCA ACGCCAAGGC CATTCCGGCG GGCCAACAGG TGCAGTGGCC GGTACATGTG
CGTTATCTCT ATGGTGCCCC CGGCGCCCAT CTGTCGGGCA CAGCGCGGAT CAGCCTGAGC
AACGGCTCTA CCCCTTATCC GCAATGGCAG CACTACCATT TCGGCCTGCA TGGCGAGGTG
TTTACGGCAC CGGTGCAAGA GCCCACGTTG CCGGAAACCG ACGCCACGGG CCTCACTCAA
GTACCCATTG ACCTGAAGAA AATACCGGAC AGCACCCGTT TTCTGGAGGC GCATGTGGCG
GTCTCCATCA ACGAGCCCTC CGGCCGCCCG GTGAACAGTC GCATCATTCT GCCCGTCACG
CCGGATCATC CCCTCATCGG CATCGAAAAC GGCTTCCGGG ATGAAACCGT AACCGCGGGG
AAATTACCGG TTTTTCACAT CGCGGCGGTA GCCCCCGATG GCAAGGCCAA GGTCATGCCG
GTGCAGATCC AGGTGGTCCG GCAGTCTTCC GAGTGGAATA TCTCCCTACA TAATGGAGTG
GCCAGTTGGG GCTATACCTA TATCAACCAT CCGGTGCTGA CCAAGGATGT AACCTTGCCA
GCCGGTCAAC CATATGCCCT GCAATTACCC GTGCTGGATT ATGGCCGTTA CCGCCTGCGA
GTGATTGAAG CCCACGGCGG CCTGGCCGCC AGTTCGGTGA TTTTTTACTC CGGCTGGCAG
ACCAGCGGCA ATCCGGGGGC GCCCCAGCGG GTTTCCGTGC GCAGCGGTGC GGCGGAATAT
GCCGCGGGCA GCACGGCCGA TATCCATGTC TCCGCGCCCT TCTCCGGCCC GGCGGTACTG
GTCATCGCCA ATGACAAGAT TTTAAAGGTG AAGAACTTTA CCCTGCCCAA AGGGGGCCGC
ACCCTGCATG TGCAGGTCCG GAAGGGCTGG GGCGCGGGCG CCTATGCGCT GGTGGATGTG
TTCCGCCCTG CCAGTGCTAC CGAGGCCCCG GAACGAGCCA TCGGTCTGAC TTGGCTCGGC
CTCCAGCCGG GCCGCCGTGC CATTCCGGTC CGCTTTGCCG TCGATCCGGT ATACCGCCCA
CGGCAGACCA TCCGGATTCC GGTGAAAACC CGCCCCGGCG CCTATGTGAC GCTGGCGGCG
GTCGATAAAG GCATCCTCAA CCTCACCCAG TTCCCCAATC CCAACCCCCT GCGCCACTTC
TTTGGCAAGC GGCGGCTGGA TATCAGCGTC TTTGACGACT ACGGCGCCCT GCTGGCCCGC
CCCACGGGTT TTGAAGCCCT GCTGCAAAAC GGCGCAGGGG CCAATTTCGG CCCGGCGGCG
CGACCCATTC CGCAGAAGGT GGTGGCGCTC TTCGCCGGCC CGGTGCAGGC CAACCGTGAT
GGCATCGCCG AACTGCCCCT CACGATGCCG GAGTTCAACG GCGAACTCCA CCTCATGGCC
GTGACCTGGA AGGGCGACGC GGTCGGTGCC GGCGACACCA ACATCATCAT TCGTAACCGC
CTCATCGCCA ACCTGCTGCT GCCGCGCTTC CTGTCTCCCG GCGACAGCGT CCAGGCTACG
GTCATGTTGC AGAACCTGAA GCTGCCAGCG GGCATATATC ACAGTCAGGT CACGGCGACC
GGGCCAATCC GCGTCGGGAG CAATGGCAGT AGTGCGGCAT CCCTGAAACC GCAAGCCATG
CGTCTGCTGC CGGTGACCCT GGCAGGCACC GGAGAGGGCA TGGCGCACCT GACCCTGACC
GTCACGGGTC CGGATGGTTA CCGCCTGGTT CGCCACTGGA ATATGGTGGT GCACTCCACG
CAGCCGCCCG TTTCCAAAAA CCATAATCTG ACGCTGGCGG CGGGCGACCA CCAGGCACTA
CAGCCGGATA CCCAGGGCTT TATCCCCGGT TCCACCGTGA GCTCGGTGAC ACTCGGCAAT
ACCATGCCCT TCAACCCCAA GGCCTATGTA CAGGCCCTTT ACCAAGGTTG GCACGGTGGT
TCCCTGCTGA ATGCCGCCAG CAAAGGTTTC CCGCTGACGG TGTTGAAGCC GCCGCTGATT
ACGCCCCGGC GTGCCGCCAA ACTCCAGGAT TACGTCAATC AGGTGCTGAA TGATCAGCGC
TATGACGGGG CCTTCGGCCT GTGGTCCAAT AATGGTGACG CCCAACCCTG GCTTACGGCC
TTTGCCACCG AATTCCTCCT CCGCGCACAA AAGGCCGGGG CCACGGTGCC GCAACCGACC
ATCGATCAAG CCTTGCACTG GTTGGGTCAG GAAGTCGAAA ACGAAAATCA CACCGTCTTT
GACCGCATCT ACGCCGTTTA TGACCTGAGC CTGGCGGGCA AACCTCCGGC GGGGGCCATC
CGTATGCTGG CACGGCACAT GAACCAGATC AGCATGCCCT TGGCGCTGGC ACAACTGGGT
TCGGCCCTCA ACACCATCGG CGAACCGCAC CAGGCGCTAA AAGCCCTGCG GAAGGCCATC
AAAACGCAAG AGCCGGTCGG CGGCGACTGG TGGTGGGGGC GTTCCGACTG GGATGCGGCC
TTTGGCTCGC CGCTGCGCGA CGCCTGGGCC GTGCCCGCCA TCATCGCGCA GACCGGTTTG
ATGCCCGATG CCGTGACCAA GTTGCGGCAG GACCTCCCCG GCGCAGGATT GGAACCCGAC
GACCTGACCA CCCAGGAACT GGCTTGGGCG CTCTACGCCG ATGGCGTGCT GGGCGGCGCG
GGTCAGACCG TCCATGGCCA ATGGGGCAAC CAGGTCATTC AGCGGTCAGG GCCCGTGGTC
CTGCCCCTGA CCGGACCCGT AACGCTACGC AATCTAGGTG ACGAAATCCT CCCCGTTTCG
CTGGCGACCA CAGGCATTAC GCTGACGCCG CCGCCCGCCG CCGCCCACGG AATGGAGGTC
AGCCGGGCTT TTTATACGCT GGCTGGTAAA CCGTTGAAGC CGGAATCCCT TCCACAAAAC
ACCGTCTTCG TAGTCGTGTT GAAAGGGGCG ATCACCGACA ACCTGCCCCA TCGCGCACTG
CTCGATATGG GTTTGCCGCC GGGCTGGGAA CTGGCCGGCA GCGTAACGCC GGGCAAGGTC
CATGGCCTGT CCTGGCTGCA TCATCTGACG GCGCCGGAAG CCACGGCCGC CACCGATGAT
CGCTACGAAG CGGCCTTTCG GATGGCCCCC AAAAACAATG ACGCGTTCAA CGGCAATGGG
GTTCCAGACT TCAAGACGGC CATCCTGCTG CGCGCCGTCA CCCCCGGTCA GTACGTCCTG
CCGGGGGTCA CCGTCAGCGA CCTCTTTCAC CCGTCCATAT TCGCGCGCAC GACCGGGCGG
AAGGTGGCCG TGACACCGCC GGCCTCCTGA
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| Protein sequence | MLEAMYRTYP ADARIAADLK KTVMTYGFQV QSVTPDANQF PTRTCVKFTA PLSEAPDFHA
SNWVTFSPVR PHAAVVRENG GICVTGLPAG SSTQTHIRAG LPAIAGAVMT AAKSITLTLP
NRSPSIISDT GRFIIPASLP PAVGFSSVNI SRVKLQINRV PERALLAFVA NHPLLNQDSD
ESTLNNQNSL TVWRGTADIP HFTQNQLMHT ILPLPKILQK PGLYAIQIGP GDGTPNANGS
LNTVQLVLRT NLAPTVWQGR NGLYVQMRRY TDASPWSGVK VELIAQDNDI LQTVRTNSDG
IAVFPKPILQ GSGGQSPAAL HIYGPGNEFT LFNLQGSPLN LSGRGISGRT ALKPVSPFLW
LDRGIYRPGE TVHVAALYRS AAGRPLDLPL HLIVRRPGGQ VFLDTVPKLS DDDAIAVPVK
LPLAAQDGNW SVSLATGVRE SALAKETFTV SAFVPPTLAV ELGNAKAIPA GQQVQWPVHV
RYLYGAPGAH LSGTARISLS NGSTPYPQWQ HYHFGLHGEV FTAPVQEPTL PETDATGLTQ
VPIDLKKIPD STRFLEAHVA VSINEPSGRP VNSRIILPVT PDHPLIGIEN GFRDETVTAG
KLPVFHIAAV APDGKAKVMP VQIQVVRQSS EWNISLHNGV ASWGYTYINH PVLTKDVTLP
AGQPYALQLP VLDYGRYRLR VIEAHGGLAA SSVIFYSGWQ TSGNPGAPQR VSVRSGAAEY
AAGSTADIHV SAPFSGPAVL VIANDKILKV KNFTLPKGGR TLHVQVRKGW GAGAYALVDV
FRPASATEAP ERAIGLTWLG LQPGRRAIPV RFAVDPVYRP RQTIRIPVKT RPGAYVTLAA
VDKGILNLTQ FPNPNPLRHF FGKRRLDISV FDDYGALLAR PTGFEALLQN GAGANFGPAA
RPIPQKVVAL FAGPVQANRD GIAELPLTMP EFNGELHLMA VTWKGDAVGA GDTNIIIRNR
LIANLLLPRF LSPGDSVQAT VMLQNLKLPA GIYHSQVTAT GPIRVGSNGS SAASLKPQAM
RLLPVTLAGT GEGMAHLTLT VTGPDGYRLV RHWNMVVHST QPPVSKNHNL TLAAGDHQAL
QPDTQGFIPG STVSSVTLGN TMPFNPKAYV QALYQGWHGG SLLNAASKGF PLTVLKPPLI
TPRRAAKLQD YVNQVLNDQR YDGAFGLWSN NGDAQPWLTA FATEFLLRAQ KAGATVPQPT
IDQALHWLGQ EVENENHTVF DRIYAVYDLS LAGKPPAGAI RMLARHMNQI SMPLALAQLG
SALNTIGEPH QALKALRKAI KTQEPVGGDW WWGRSDWDAA FGSPLRDAWA VPAIIAQTGL
MPDAVTKLRQ DLPGAGLEPD DLTTQELAWA LYADGVLGGA GQTVHGQWGN QVIQRSGPVV
LPLTGPVTLR NLGDEILPVS LATTGITLTP PPAAAHGMEV SRAFYTLAGK PLKPESLPQN
TVFVVVLKGA ITDNLPHRAL LDMGLPPGWE LAGSVTPGKV HGLSWLHHLT APEATAATDD
RYEAAFRMAP KNNDAFNGNG VPDFKTAILL RAVTPGQYVL PGVTVSDLFH PSIFARTTGR
KVAVTPPAS
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