Gene AFE_2245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2245 
Symbol 
ID7136625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1994717 
End bp1995910 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content56% 
IMG OID643530613 
ProductNa+/H+ antiporter, putative 
Protein accessionYP_002426643 
Protein GI218667660 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.207208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACCGG AAACTACCAT ACTCTATCTC TTTATGGCGG CCTCATTGCT GTCGGTACTG 
GCGAACCGCT TTCACATTCC CTATACCGTT GCACTGGTGC TGGGCGGCTT GGTGCTGGAG
ACGTTACACC TGTTTCGGGC GCCGGTACTG ACCCATGATC TGGTATTCGC CCTCTTTCTG
CCCGGGTTGA TTTTTGAGTC TGCCTACCAT CTCTCCTCCG GCGCCCTGTG GCGTGACCGT
CTCGCCATAT TCGGCCTGGC GGTGCCGGGT GTGCTTATTT CCATAATCGT GACCGCTTTC
ATGTTTCTCT GGAGCAGACA ATATCTGCCC GATTCATCGA ATGTGGTCAT GCCCGTCAGT
GTCGCGCTGG TATTCGGCGC CGCTGTGGCG GCCACCGACC CGATTTCTGT GGTCTCCATA
TTTCGCAAAC TGCAGGCGCC CGCACGGTTG ACCCTTATAG TAGAGAGTGA AAGTCTGCTT
AACGATGGTA CGGCTATCGT CTTTTTTAGC CTTTTCCTTG CGCTGGCGGA AGGCAAAACG
GTATCCGCTT CGGCACTGGG CATTCAATTT TTCGCAATGG TCGGCGGTGG CGCGCTGGTG
GGCGTGGTCA TTGGCTGGCT GAGTTCCGAA ATCATCAAAC GCGTCAATGA TGGCATGGTC
GAAATCACCA TCACCATTCT CGCGGCCTAT GGCAGTTTTC TCGTTGCGAT GCAGCTCGAC
TATTCCGGCG TCATCAGTAC CGTCGTCGCC GGGCTGATCT GCGGCAATTA CGGGGCCAAA
CAAGGGATGA CGGCATCCGT TAAAATGGCG GTCCACACGT TCTGGGAATA TATCGGTTTT
GCCCTGAATT CAATCATCTT TCTACTCGTC GGTTTCACCA TCCACTTGCC TGACCTGCTC
GGTATCTGGC CCTTGATTCT GGCCGCTTAT GTAGCGGCCA CCTTTGCCAG AGCCGCGGTC
ATTTACGGGA TGAGCGGATT ATTGAGTCGC ACGCGGGCCA GGATACCTCC TGCCTGGAAT
TTTGTGCTGG TCTGGGGCGG CATCCGCGGG GCGCTGTCCA TGGTGCTGGC CCTGAGTCTT
CCGCATGACT TTCCCCATCG CTCCCTGCTG ATTAACCTGG TTTTTGGCGT CGTATTACTG
ACCATCCTGA TTCAGGGACT GAGCATTTCG CCGCTGGCAC GGAGGGTGTC CTGA
 
Protein sequence
MIPETTILYL FMAASLLSVL ANRFHIPYTV ALVLGGLVLE TLHLFRAPVL THDLVFALFL 
PGLIFESAYH LSSGALWRDR LAIFGLAVPG VLISIIVTAF MFLWSRQYLP DSSNVVMPVS
VALVFGAAVA ATDPISVVSI FRKLQAPARL TLIVESESLL NDGTAIVFFS LFLALAEGKT
VSASALGIQF FAMVGGGALV GVVIGWLSSE IIKRVNDGMV EITITILAAY GSFLVAMQLD
YSGVISTVVA GLICGNYGAK QGMTASVKMA VHTFWEYIGF ALNSIIFLLV GFTIHLPDLL
GIWPLILAAY VAATFARAAV IYGMSGLLSR TRARIPPAWN FVLVWGGIRG ALSMVLALSL
PHDFPHRSLL INLVFGVVLL TILIQGLSIS PLARRVS