| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2239 |
|---|
| Symbol | |
|---|
| ID | 7135745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 1991751 |
|---|
| End bp | 1992794 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643530607 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002426637 |
|---|
| Protein GI | 218666178 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.246106 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGCACGC TGAACGTGCA GGGCGTGGCC AGCGGCTACG CCGTCTGGCA GGACAACAAG
TTCGCAGGAT CAGGCAATCC CGGCAACAAA TCTGCGTCCG CCGACATCAG CAACGGTCAG
GTGATCATCC AGAAGAACTC CGGTCTGGTG CAGTTCTATC TGCAGGCAGG GGCCTATAAC
GTCATGAGCC TCGGGTCCAA TTTTGTCTCC ACCGGCACCT TCACCCAGAA CACCTTCGGT
GCCCTGCCCG TCGGTTATCT CGAAATTGCC CCCACCGATA ACTTCAATGT CCAGATCGGC
AAACTCCCGA CCCTGATCGG CGCGGAATAC ACCTTCAGCT ACCAGAACTG GAACATTGAG
CGCGGCCTGC TCTGGGGCCA GGAGAATGCC GTCAACAAGG GCATCCAGGC CAATTACACC
ATGGGGCCGG TCACCGCCTC GGTATCCTGG AATGACGGCT TCTATTCCAA CCGATTCAAC
TGGGTGACTG GCGCCCTGAC CTGGGCCATC AACAAAGAAA ACAGCGTTTT CTTCCAGGCC
GGCGGCAATA TGGGGCATAC GAATTTTGCC TATTCCTCCA TTGCCACCAC ACCTCTGCAA
AACAATGAGA GTATCTACGA CTTGGGCTAT ACCTATACCG GTGAAAACCT CCTCGTGACG
CCTTATGTGC AGTACACCTC CGTTCCGGCG AGCGCGGTGA ATGCCTATTC CGGAATCACG
AACGGGAGCA ACACCAGCAC TATCGGCGCT GCCGTTTTGG CAGATTACAG CCTGACCAAC
ACCATGTCCG TTGCCGGTCG CGTGGAATAC ATCGCCAATT CCGGCAACCC CAACGATGGC
GCTGCCAATC TCACCGGCTT CGGCCCTGGC TCCCATGCCT GGTCCGTCAC CGTCACACCC
ACCTACCAGG AAGGCGGCTT CTTCGCCCGC GCCGAGTTGT CCTACGTGGA TGCCTCCATG
CCCACCGGCT TTGGTTGGTC CGGCACCAGT GGCGTAGGTG GTACCCAACT CCGGGGCATG
GTGGAAGGCG GTTTCATGTT CTGA
|
|---|
| Protein sequence | MGTLNVQGVA SGYAVWQDNK FAGSGNPGNK SASADISNGQ VIIQKNSGLV QFYLQAGAYN
VMSLGSNFVS TGTFTQNTFG ALPVGYLEIA PTDNFNVQIG KLPTLIGAEY TFSYQNWNIE
RGLLWGQENA VNKGIQANYT MGPVTASVSW NDGFYSNRFN WVTGALTWAI NKENSVFFQA
GGNMGHTNFA YSSIATTPLQ NNESIYDLGY TYTGENLLVT PYVQYTSVPA SAVNAYSGIT
NGSNTSTIGA AVLADYSLTN TMSVAGRVEY IANSGNPNDG AANLTGFGPG SHAWSVTVTP
TYQEGGFFAR AELSYVDASM PTGFGWSGTS GVGGTQLRGM VEGGFMF
|
|---|
| |