| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2223 |
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| Symbol | |
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| ID | 7134140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1973783 |
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| End bp | 1976272 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643530591 |
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| Product | penicillin-binding protein 1A, putative |
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| Protein accession | YP_002426621 |
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| Protein GI | 218666744 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCAAG CGAATACCCC GCGCGCGCGC TCCAGGCAAC CGAAGCGCCA CCATTATGGA
CGCTGGATTT TACTGATCAT CCTGCTGATT CTGATCAATA TCGGGATCGG TGTCGGCATT
TATGTCTACC GCATCTGGCA AACTCTACCG CCTGTCCACG AACTCAAGGA ATGGCATCCG
GATGAACCCT TGCGGATATA CGCGGCGAAC GGCGCGCTGC TGCAGGAGGT CGGTCCTCAG
ATGCGATATG CGCTGCCCCT CGACCAGATT CCGGCCCGGT TGCAGGAGGC CTTCATATCC
GCTGAAAACG CTCGTTTCTA CAGTAACAAC CCGCTGTATT ATCCGGTCAG TTATCCCGGT
ATTCTGCGTG CGGCGGCGGT GGACATCATT CATATGGCGC CGATGCAGGG TGCCAGCACC
ATCCCGGAGC AGGTGGCCCG GAACTTTTAC CTGACTCCGC AAAAAACCAT TTCCCGGAAG
ATCGCGGAAA TTCTCCTGGC ATACAAACTC GCCGCTCATT TTACCCATAA GCAGATTCTC
GAGCTTTATC TGAACAAGAT TTATCTCGGG CAAGGGGCCT ACGGCGTGCA GGCAGCGGCC
CGGACCTATT TCGGAAAAGG CGTCAGCGAA CTGACCCTGG GGGAGATGGC AACCATTGCC
GGCCTACCAC CGGCGCCTTC GGTGTTGAAC CCCGTAGTGA ATCCCGATCT CGCCAGGAGG
CGCCGCAGCT ATGTGCTCAA ACGCATGGAA AAGCTCGGCT ATATTTCTGC GGATGAGGAG
GCGAAGGCCA ATGCGGAACC CATTCTCTCG CGCTATCATG CCGCCGCCAG CAATGGCGCG
CCCTACGTCA CCGACTGGAT CGCCAGTTGG CTCACCCAGC AATTTGGCAG CGATTTCACT
TACCGTTCCG GCCTCAAGGT GTATACCACC ATCGTGCCCA AAGATCAGGA AGCGGCGAAT
GAGGCGATTG CCGTGGGCTT GGAGAACTAC GATATGGGGC TCTCCAGCAT GGACCCCAAA
AGCTACCGCG GCCCCATCGC ACGTCTCAGC GGGGCTGCGC TACAGGCGGC TCTCGCCGGC
AAGCGGCCTG ACCTATTGCC ACCACATGAC CCGGCCAACC TCAAATGGGG TGTAGTGGTG
GGCGCCGACC CCAAAAGCGC CACGGTCTCT CTGGAAGGCA GAAAAAATGT CACGCTGACC
CTGCGCGACG TCAACTGGGC ACGCCCCCGC GTGGGCGCAC CCATGCCGCG TACGGTAAAC
GCGGTCCTGC ACAGCGGCGA CCTGATCTGG CTACGCCCTT ATGTCAACGC TGTCACGGCG
GGGGCTGGCC AGGAATGGGG AGCCAATGTC TGGTCCTCGG CCGGGAAGAA CGCGGGCTGG
CAGCTTTCAC AAATTCCCCA GGTACAGGGT GCCTTGGTCA GTCTGGACAG TCGCACCGGG
GCCATCCACG CCTTGGTGGG CGGCTTCAGC TATGAACTCA GCCATTTCGA TCGCGCCGTG
TTTGCCTACC GGCAACCCGG ATCGGGCTTC AAGCCGTTCG TCTACGCCGC GGCCATGGAT
GCGCCGGCAC TGCTGGCTTC GGGCAAGAAC ACCTACATGA CGCCCCAGAC CCCGATTCCG
GACACCCCCC TGTCCATCAC CCTGCCCACC GGCCAGGTCT ATGTACCGAC CAACTACAGT
AACCAGTTCT CCAATACGCC GATCCCGGTA TGGTCGAACC TGGCTTACTC CCACAACGTG
CCCAGTGTGC GTATCCTGAT GGATATCGGC ATTCCCTACG CGGCGCAGTA TGTGCAACGC
TTTGGTTTTC CGGCAAAGCA GGTGCCTCAG GTGCCGTCCA TGGTGCTGGG CGCGGGGGAC
TACAGCCCCC TGCAACTCGC TCGCGCCTAC GCGGTCTTCT CCAGTGGCGG TTTTTTGCCC
AAGCCCTATC TCATCACCAG AATCGTGAAC AGTCGTGGCA CCCAGATCTC CCTGCTCAAC
TGCCCCATGG GCTATACTCC GCCCCCCCAG CAGACGGCCA TACCCCCCGG GGTGGCCTAC
CTGCTGACCG AAATGATGCA GCAAGTGATC AAAATCGGGA CCGGTGTCGC CGCCCAGAGC
CTCGGGCGCA ATGACATCGC CGGCAAAACC GGCACGACCA ACCACGAAAA CAACGCCTGG
TTCAACGGGT TTAGCCCGCG CATCACCACC AGCGTCTGGG TGGGCTACGA CGACAACCGC
ACCATGGGCC GCTGGGCTGC GGGTGCGCGG GAGGCGTTGC CGATCTGGAT TCACTATATG
CGGACGGCCA TGGCGGGCAG CCCGTCTACC GGATTCTTCC GGCCACCCTC GGTGACCGGC
CCGACCATCA GCGGTGGCAG CAATGTCATC GGCGTCAGTG ATTATCTTGC AGGATATCCG
CCCGTTGCCG CGCCCACGGC GTCAACGACA AGTGGCGCGG GAACGGATAT CGGCGACAGA
CTGATGAACA CCATCAAGAG CCTTTTCTGA
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| Protein sequence | MAQANTPRAR SRQPKRHHYG RWILLIILLI LINIGIGVGI YVYRIWQTLP PVHELKEWHP
DEPLRIYAAN GALLQEVGPQ MRYALPLDQI PARLQEAFIS AENARFYSNN PLYYPVSYPG
ILRAAAVDII HMAPMQGAST IPEQVARNFY LTPQKTISRK IAEILLAYKL AAHFTHKQIL
ELYLNKIYLG QGAYGVQAAA RTYFGKGVSE LTLGEMATIA GLPPAPSVLN PVVNPDLARR
RRSYVLKRME KLGYISADEE AKANAEPILS RYHAAASNGA PYVTDWIASW LTQQFGSDFT
YRSGLKVYTT IVPKDQEAAN EAIAVGLENY DMGLSSMDPK SYRGPIARLS GAALQAALAG
KRPDLLPPHD PANLKWGVVV GADPKSATVS LEGRKNVTLT LRDVNWARPR VGAPMPRTVN
AVLHSGDLIW LRPYVNAVTA GAGQEWGANV WSSAGKNAGW QLSQIPQVQG ALVSLDSRTG
AIHALVGGFS YELSHFDRAV FAYRQPGSGF KPFVYAAAMD APALLASGKN TYMTPQTPIP
DTPLSITLPT GQVYVPTNYS NQFSNTPIPV WSNLAYSHNV PSVRILMDIG IPYAAQYVQR
FGFPAKQVPQ VPSMVLGAGD YSPLQLARAY AVFSSGGFLP KPYLITRIVN SRGTQISLLN
CPMGYTPPPQ QTAIPPGVAY LLTEMMQQVI KIGTGVAAQS LGRNDIAGKT GTTNHENNAW
FNGFSPRITT SVWVGYDDNR TMGRWAAGAR EALPIWIHYM RTAMAGSPST GFFRPPSVTG
PTISGGSNVI GVSDYLAGYP PVAAPTASTT SGAGTDIGDR LMNTIKSLF
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