| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2203 |
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| Symbol | holC |
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| ID | 7136667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1952562 |
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| End bp | 1952987 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643530570 |
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| Product | DNA polymerase III, chi subunit |
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| Protein accession | YP_002426601 |
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| Protein GI | 218665282 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2927] DNA polymerase III, chi subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCCTGTCG CCTCGTTTTA TACCCTGCCC CCGACACTGC TTACCGCGCA CGAACAGCGG
CGCGGCATGT GCCGGGTGAT TGCCAAGGTG TGGCAGGTCA TGGGAGAAGC AGATATCCTG
TGTCCGGATA CGGAGGCCGG ACAGACCCTG GATGACCTGC TCTGGACCTT TCAGGCGGGA
GCTTTCGTGC CCCATGCCCG GGGTGCAGGA GAACCGGTAC GCATCCACGA GAACGGTGCA
TGGCCCTTGC AGGGCAAGGC GCTGGTGCTC TGCGGGCTGG ACAAATTGCC AGCGCCCCTC
CCCCCCTGCG AGCGGCTCAT CGACTTCATT CCGGTCGCAG AGCAACTGCG CGGCTTCGCC
AGAGAACGAT ACAGACAATT AAAGAACGCA GGATTCACCA TGCAGGTGCA TCCCCTGGAA
GCCTGA
|
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| Protein sequence | MPVASFYTLP PTLLTAHEQR RGMCRVIAKV WQVMGEADIL CPDTEAGQTL DDLLWTFQAG
AFVPHARGAG EPVRIHENGA WPLQGKALVL CGLDKLPAPL PPCERLIDFI PVAEQLRGFA
RERYRQLKNA GFTMQVHPLE A
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