Gene AFE_2190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2190 
Symbol 
ID7135056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1943259 
End bp1944062 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content62% 
IMG OID643530558 
ProductABC transporter, permease protein 
Protein accessionYP_002426589 
Protein GI218666313 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.277433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCCATA GGGCGGCCGT AGGGATTGGC ACAGGACGCC AGCCATCGGC GCGCTGGATA 
GCGACGGCGA CCGCTGCCAC CGTCCTGACG TTTCTGCTGG CGCCTTTCGC GGCGCTGGTT
TTCGCCACGG ACTGGCACGA TTTTCATTTT GCGCCCGGCG ACCTCGCCGC CATCCGGGTT
TCCCTGTTTT ACAGTGCCCT GGCTCTGGTG CTGGTGGTGC TGGCAGGAAC ACCGCTCGCA
TGGTGGTTGG CGCATTATCA TTACCGCGGC AAATGGCTGG TGGATGCGCT GCTGCTGTTG
CCGCTACTGA CCCCACCCCT GGCCATGGGC ATTTTGCTGA GTTCCTTTTA CGGACCTTAC
TCAGCAGTGG GTGGCCTGTT CAGTCAGGCG GGGCTCTACC TGACCAATAC CGCCCCGGCG
TTCGTGCTGG CGCAGATTTA CGGGGCCATG CCCTACTATG TGCTGGCCGC CCGTGCTGCT
TTTGAGGGGG TTCCGGAAGA ACTGGAGCAG ATCAGTCGCA CCCTGGGCCG CAACCGCTGG
CAGACTTTCT GGTGGGTGAC GCTGCCGCTG GCCCGTCTGG GACTGACGGC CGGGGTGGCT
CTGGCCTGGG TGCGTGCCAT GGGCGAGTTC GGCATCGTGC TCATCGTGGC GTATTTCCCG
CAGGGCATTC CGGTCAAGCT TTGGGTCAAT CTGGAGGATA TGGGGCTGAG TGCGGTTTAC
CCTCTGCTCT GGGTATTTTT TCTGGTCGCT GTGCCTTTAC CTTTGTGGCT GGGGTTGCGC
TCGCGCCGAC AGGGAATGTT CTGA
 
Protein sequence
MSHRAAVGIG TGRQPSARWI ATATAATVLT FLLAPFAALV FATDWHDFHF APGDLAAIRV 
SLFYSALALV LVVLAGTPLA WWLAHYHYRG KWLVDALLLL PLLTPPLAMG ILLSSFYGPY
SAVGGLFSQA GLYLTNTAPA FVLAQIYGAM PYYVLAARAA FEGVPEELEQ ISRTLGRNRW
QTFWWVTLPL ARLGLTAGVA LAWVRAMGEF GIVLIVAYFP QGIPVKLWVN LEDMGLSAVY
PLLWVFFLVA VPLPLWLGLR SRRQGMF