| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2175 |
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| Symbol | rsuA |
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| ID | 7136122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 1928171 |
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| End bp | 1928926 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643530543 |
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| Product | ribosomal small subunit pseudouridine synthase A |
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| Protein accession | YP_002426574 |
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| Protein GI | 218665791 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTTTTC GTCAGCCTGT CCGACAGGCT AAACTGCGTC CTATGCAAAA ATCTGCCGAG
CGTATGGATC ATTTACTGTC CCGCCTAGGG TATTGCAGCC GCTCCGAAGT GCGCGACCTG
TTGCGCGAGG GGCGCGTGCG CGTGGCTGGG GAACTGCTGC GCAAGGCGTC TGCCAAGGTG
AATGCGGCCG AGGTTTGGGT GGATGAGGAG CCCATTGATC ATCCCCATGC TTTCTATCTG
CTCTATCATA AACCTCTGGG GAAGGTCTGT GCTCACGATG ATCCCCGCGC CATCTATCAG
GATTTTCCCC TGCGCTGGCG CTATCGGCGA CCAGCGCTGA GCAGTGTCGG TCGGCTTGAC
CGGGAGACCA GTGGGGTCCT GCTGCTCACC GATGACGGTG ACTGGCTGCA CCACTGGACG
AGCCCCCGCC GTGCCATTCC CCGGGTATAT CGGGTGACCC TGCAGGAGCC GTTGCGGAGT
GACGCGGCGG ACATCCTGGC CGCGGGAACC CTGATGCTGG ACGGTGAAGA CACACCCTGT
CGCCCTGCCG CGTTGCACTG CCTGACAGAG CGCGAGGTCC GGCTGACCCT GACGGAGGGG
CGTTATCATG AAGTCCGCCG GATGTTCGCG GCGCTGGATA ATCTCGTGCT GACTCTGCAT
CGGGAGGCCT ACGGCCCTTT TTTGCTGGAC GATCTCCCGG CCGGTCAGTG GCGTGAACTC
ACGGTGGCAG AGCGTATGAC GGAGGAAATT CCATGA
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| Protein sequence | MAFRQPVRQA KLRPMQKSAE RMDHLLSRLG YCSRSEVRDL LREGRVRVAG ELLRKASAKV
NAAEVWVDEE PIDHPHAFYL LYHKPLGKVC AHDDPRAIYQ DFPLRWRYRR PALSSVGRLD
RETSGVLLLT DDGDWLHHWT SPRRAIPRVY RVTLQEPLRS DAADILAAGT LMLDGEDTPC
RPAALHCLTE REVRLTLTEG RYHEVRRMFA ALDNLVLTLH REAYGPFLLD DLPAGQWREL
TVAERMTEEI P
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