| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2166 |
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| Symbol | |
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| ID | 7134676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1918446 |
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| End bp | 1919783 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643530534 |
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| Product | toxin secretion protein, HlyD family |
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| Protein accession | YP_002426565 |
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| Protein GI | 218665040 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACAC GTGACGATCA AACATTATTT CGCCCAGATG CGATCCAAAG CTCCGGGGCA
TCCTGGCTCG GTCCTATCCG CTTGGGTTCG CCCGTCCATC ATCATGTCTA CGCGGTCATA
GCGCTATTCG TCACGCTGGC GATCATCCTG CTCCTGATTT TCGGTCATTA CACGAGACAC
CTGGCCGTCA CCGGCATACT GGTCCCGTCA CAAGGCCTGT TAACGATATC CGCCCCTATT
TCCGGCACGG TTGAAAAAGT GTTGGTGCAT TCTGGCGAAA AGGTTCGCGC CGGTGCCCCA
TTGCTGGAAA TCGCCAGCAA CCCAGATAAT CCTTCCGTGG GATTAGTGGC GACCATCATC
GAACAATCCA TCAATGCGGA AAAACGGGTT CTGAGCGGCA GCCTTTCCGC GGCGCGTTCT
GTTTCCCGCA TGCAGCAGAC GGCCTTGCGG GACAAACTGC AACTTCTGCA GGCCCAACTG
GCGGAAACGA GCGCCGAGAT TGCCATCCAG CATCAGGATA TTAACAGCAC CGAGAAAGTG
TTGCGGGAAT TTATGAGCGT GCGAGGCAGG GGCCTCGTTT CGGATCCCGA ACTCCAGCAG
CAGCATCTCA CGGTCTATAG TGCCGAGACG CAACTGGAAG GCCTTGAACG CCAGCGGACG
GAACTTGCGC AGAACATCAG TAGCGCGACC CATCAACTGG GGGAGTTGCC ATTGACGTCC
TTGAACCAGG AAAACACCAT CCGCAGCAAA CTGGAAACGC TTCGTCAGGA ACTGGCCAAA
ACCGCCGGCA GCAATGTTCT CCTCATACGC GCCCCCGCCA ACGGCATTGT TTCCGCCATG
ACCGTCAACC CCGGCCAGGC CATCGCCGCC GGGCAACCCG TCTTATCCGT CATGCCGGCC
GGGGATCCCC TGCGCGCCCA GTTGCTTGTG TCAAGCCAAG CCATCGGCTT TCTGACCGTA
GGTGGGACGG TCGCATTGCA TTACGCGGCC TTCCCCTACC GGGATTTTGG CACCTTCCAT
GGCACCGTGC GTAGCATTTC TGGTAGTGCA CTAACGCCTG CGGAGATTGC CGCCCTCACC
GGTGCCCATT CCACGGTCCC GCTCTATCGG ATCATGGTCC AATTGCATCG TACCACCGTG
GAAGTCCATG GCCGCCAAAA ATCGCTACGT GCTGGCATGC AACTCCATGC AGAAATCACC
CTCAATCGAC TGCGCCTTAT TCAATGGGTC TTTGAACCCC TGTATGGTCT CGGTCACGAT
CTCTTTCCGA ATTCGCGGCA TGCGGATCAT TCCGCAGCAG CACCTTCACC GATCATCGCC
CAGCCATCCC TGCCATGA
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| Protein sequence | MPTRDDQTLF RPDAIQSSGA SWLGPIRLGS PVHHHVYAVI ALFVTLAIIL LLIFGHYTRH
LAVTGILVPS QGLLTISAPI SGTVEKVLVH SGEKVRAGAP LLEIASNPDN PSVGLVATII
EQSINAEKRV LSGSLSAARS VSRMQQTALR DKLQLLQAQL AETSAEIAIQ HQDINSTEKV
LREFMSVRGR GLVSDPELQQ QHLTVYSAET QLEGLERQRT ELAQNISSAT HQLGELPLTS
LNQENTIRSK LETLRQELAK TAGSNVLLIR APANGIVSAM TVNPGQAIAA GQPVLSVMPA
GDPLRAQLLV SSQAIGFLTV GGTVALHYAA FPYRDFGTFH GTVRSISGSA LTPAEIAALT
GAHSTVPLYR IMVQLHRTTV EVHGRQKSLR AGMQLHAEIT LNRLRLIQWV FEPLYGLGHD
LFPNSRHADH SAAAPSPIIA QPSLP
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