Gene AFE_2160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2160 
Symbol 
ID7136655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp1912890 
End bp1913597 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content51% 
IMG OID643530528 
Producthypothetical protein 
Protein accessionYP_002426559 
Protein GI218667932 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAAT TTGTCGATAA TTTACTCGGA GATAGGGACG CGCCGGCACA GACCCTGACA 
GGGAACCCTT TTGCACATGA AGGGGATCGC GAGATAACGC TGCGCTTCGA CCTTTCGGCC 
ACACAAAGCG CCATGCACAA AGCCGATCCC GATAATCTCG TTCTAGGATA TACCCGGACA 
ATGATGGGGT TCCTGATCTT CCAGCCAAAA CCCGAGCGGA TCGCGATGAT CGGCTTGGGC 
GGTGGCTCGC TGGCGAAATA TTGCCTGCGC CATATCCCGG ATGTGCACTT CATGGCAATA 
GAGATCAACC CCAGGGTTAT TGCCCTGCGC GACAAATTCA GAATCCCTCC GGATGGTCCA 
AAATTCAAAG TGATTTGTGC TGAGGGCGCG GTATATGTCC GATACCGCTC CAAACTTGTC 
GATGTGCTGC TCATTGACGG ATTCAACCAC GATGGTCAGG CCAGACAGTT ATGCAGCGCG 
GAGTTCTACG CGCATTGCTA CGCCAAACTC CGGAAGGGTG GCGTATTGGT GGTCGATATG 
CTAAATAGTG ACAGAAGGTG CGCAACCTAT ATCACCGGAA TCCGCGAGAG ATTTGACGAC 
CATGTCATTG CTATCGAGGC GGAATTGTTT GGGAACAGGG TAGTCTTTGC GTATACGGGA 
CATTCATATT CTGGTCCACA AGATGCTGTT TTTATCAATA ACCACTAA
 
Protein sequence
MDEFVDNLLG DRDAPAQTLT GNPFAHEGDR EITLRFDLSA TQSAMHKADP DNLVLGYTRT 
MMGFLIFQPK PERIAMIGLG GGSLAKYCLR HIPDVHFMAI EINPRVIALR DKFRIPPDGP 
KFKVICAEGA VYVRYRSKLV DVLLIDGFNH DGQARQLCSA EFYAHCYAKL RKGGVLVVDM 
LNSDRRCATY ITGIRERFDD HVIAIEAELF GNRVVFAYTG HSYSGPQDAV FINNH