Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2158 |
Symbol | |
ID | 7136926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1911627 |
End bp | 1912532 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643530526 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002426557 |
Protein GI | 218667231 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCTCA CCTTTCGCCA GCTACAGGTG TTTACCGCTG TGGCGAAACA TCAGAGCTTT ACCCGCGCCG CGCAGGCGCT CTATCTCAGC CAGCCCGCCG TATCCATGCA GGTCCGGCAG ATGGAAGAAC AGGTCGGACT GCCGCTCTTT GAACAACTGG GGCGCCGGAT CTATCTCACC GAAGCGGGGC GGGAAATGGC GCGCTACAGT GCCGCCATTA CCCAGCAACT CGAAGAGGCG GTACAGGTGA TCAACGACCT CAAGGGGTTG GCGGGGGGGC ATATTCATAT CAGTGTGGCC ACCACCGGGG CTTATATTGC GCCCTATCTG CTCGCGGCGT TCAGCAAATT ACATCCGCAG GTCACGGTCA GCATGGATGT CACCAACCGG GAGACCCTGC TGCATCAACT GGCGGAGAAC GAAGTGGATA TTGCCATCAT GGGGCGGCCG CCTGCAGGGC TGGCGCTGGA GGCTACGGCC TTTCTGGAAA ATCCGCTGGT GATCATTGCT GCACCGGATC ATCCCCTGGC CCGGATCAAG GCGATTACTC TGGACATGGT GGCAACTTAC CCCTTCATTA TGCGGGAGCC GGGTTCGGGG ACGCGAATCG CGGTGGAACA ATTTTTTGAA AAGGCCGGGG TTGCGCTGCA CGCGAGCATC GAAGTCAGCA GCCACGAGGC GATCAAGCAC GCGGTGCGCG CCGGTATGGG CCTGGGCATC GCGTCTCTGC ATACGGTGCG GGAAGAATTG CTGGCAGGAC ACCTGGCGGT GCTGGATGTG CAGGGCATGC CTATCGAACG CCATTGGTAT CTGGTGCATC GTCAGGGTAA GCGCCTCTCG GCGGCCGCTC AGGCCTTCCG GGATTTTCTG CTGAACCAGG ATGCGGCACG GTTGCTGCCT GCATAG
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Protein sequence | MHLTFRQLQV FTAVAKHQSF TRAAQALYLS QPAVSMQVRQ MEEQVGLPLF EQLGRRIYLT EAGREMARYS AAITQQLEEA VQVINDLKGL AGGHIHISVA TTGAYIAPYL LAAFSKLHPQ VTVSMDVTNR ETLLHQLAEN EVDIAIMGRP PAGLALEATA FLENPLVIIA APDHPLARIK AITLDMVATY PFIMREPGSG TRIAVEQFFE KAGVALHASI EVSSHEAIKH AVRAGMGLGI ASLHTVREEL LAGHLAVLDV QGMPIERHWY LVHRQGKRLS AAAQAFRDFL LNQDAARLLP A
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