Gene AFE_2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2158 
Symbol 
ID7136926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1911627 
End bp1912532 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content60% 
IMG OID643530526 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002426557 
Protein GI218667231 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCTCA CCTTTCGCCA GCTACAGGTG TTTACCGCTG TGGCGAAACA TCAGAGCTTT 
ACCCGCGCCG CGCAGGCGCT CTATCTCAGC CAGCCCGCCG TATCCATGCA GGTCCGGCAG
ATGGAAGAAC AGGTCGGACT GCCGCTCTTT GAACAACTGG GGCGCCGGAT CTATCTCACC
GAAGCGGGGC GGGAAATGGC GCGCTACAGT GCCGCCATTA CCCAGCAACT CGAAGAGGCG
GTACAGGTGA TCAACGACCT CAAGGGGTTG GCGGGGGGGC ATATTCATAT CAGTGTGGCC
ACCACCGGGG CTTATATTGC GCCCTATCTG CTCGCGGCGT TCAGCAAATT ACATCCGCAG
GTCACGGTCA GCATGGATGT CACCAACCGG GAGACCCTGC TGCATCAACT GGCGGAGAAC
GAAGTGGATA TTGCCATCAT GGGGCGGCCG CCTGCAGGGC TGGCGCTGGA GGCTACGGCC
TTTCTGGAAA ATCCGCTGGT GATCATTGCT GCACCGGATC ATCCCCTGGC CCGGATCAAG
GCGATTACTC TGGACATGGT GGCAACTTAC CCCTTCATTA TGCGGGAGCC GGGTTCGGGG
ACGCGAATCG CGGTGGAACA ATTTTTTGAA AAGGCCGGGG TTGCGCTGCA CGCGAGCATC
GAAGTCAGCA GCCACGAGGC GATCAAGCAC GCGGTGCGCG CCGGTATGGG CCTGGGCATC
GCGTCTCTGC ATACGGTGCG GGAAGAATTG CTGGCAGGAC ACCTGGCGGT GCTGGATGTG
CAGGGCATGC CTATCGAACG CCATTGGTAT CTGGTGCATC GTCAGGGTAA GCGCCTCTCG
GCGGCCGCTC AGGCCTTCCG GGATTTTCTG CTGAACCAGG ATGCGGCACG GTTGCTGCCT
GCATAG
 
Protein sequence
MHLTFRQLQV FTAVAKHQSF TRAAQALYLS QPAVSMQVRQ MEEQVGLPLF EQLGRRIYLT 
EAGREMARYS AAITQQLEEA VQVINDLKGL AGGHIHISVA TTGAYIAPYL LAAFSKLHPQ
VTVSMDVTNR ETLLHQLAEN EVDIAIMGRP PAGLALEATA FLENPLVIIA APDHPLARIK
AITLDMVATY PFIMREPGSG TRIAVEQFFE KAGVALHASI EVSSHEAIKH AVRAGMGLGI
ASLHTVREEL LAGHLAVLDV QGMPIERHWY LVHRQGKRLS AAAQAFRDFL LNQDAARLLP
A