Gene AFE_2146 details

Gene Information

• Locus tag: AFE_2146
• Symbol: pth
• ID: 7137205
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 1897303
• End bp: 1897872
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643530514
• Product: peptidyl-tRNA hydrolase
• Protein accession: YP_002426545
• Protein GI: 218665738
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0193] Peptidyl-tRNA hydrolase
• TIGRFAM ID: [TIGR00447] peptidyl-tRNA hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACTGGT TGTTGGCGGG CCTGGGTAAC CCCGGCGCGG AATACGCCCG TACCCGCCAC 
AATGCCGGCT TCTGGACGCT CCAGACCCTT GCGGATCGGG TCGGGGCGTC TTTGCGTATG 
GAGAAGCGCT GGCATTGTCT GGCTGCTACG GCGCGAGCTT CCGGACTGGA ACTGGGGCTG 
TGTATGCCCC AGGATTTCAT GAACCGCAGT GGCGGCCCGG TGCAGGCCAT GGCGGCCTTT 
TATAAAGTAG CCGCGGAACG GATTCTGGTG ATGCATGACG AACTGGACCT TCCGCCGGGC 
GCAGCGCGGC TGAAACGCGG TGGAGGTCAT GGCGGCCACA ACGGCCTCCG CGATCTCGAC 
CGTGCCCTGG GCACACGGGA TTACTGGCGA CTGCGTATCG GCATCGGCCA TCCGGGGCAC 
AAGGACGCGG TCATCCCTTA TGTGCTGAGC GCCCCACCGC CAGCGGATAA GACCCTGATT 
GACGAGGCGA TTGAACGCAG CCTCGGCGTA CTTCCCGACT TTCTCTGCGG CCGCACGGAT 
GCGGCGCAAA AATCCCTGCA CAGCGATTAG 

 

Protein sequence

MDWLLAGLGN PGAEYARTRH NAGFWTLQTL ADRVGASLRM EKRWHCLAAT ARASGLELGL 
CMPQDFMNRS GGPVQAMAAF YKVAAERILV MHDELDLPPG AARLKRGGGH GGHNGLRDLD 
RALGTRDYWR LRIGIGHPGH KDAVIPYVLS APPPADKTLI DEAIERSLGV LPDFLCGRTD 
AAQKSLHSD