Gene AFE_2145 details

Gene Information

• Locus tag: AFE_2145
• Symbol: rplY
• ID: 7134671
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 1896688
• End bp: 1897296
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643530513
• Product: ribosomal protein L25
• Protein accession: YP_002426544
• Protein GI: 218666710
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1825] Ribosomal protein L25 (general stress protein Ctc)
• TIGRFAM ID: [TIGR00731] ribosomal protein L25, Ctc-form

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGATT TTGCGATTGC GGCCCAGCCG CGCGAAGATA TCGGCCGTCG TGCCAGCCGC 
CGCCTGCGCC GCACCGGCAT GGTGCCCGCC GTGCTCTACG GGGACGGCAA GGCCGCAATG 
GGCATCTGCA TCGAAGCCCG CCTGCTGCGC AAGCTGTTGC CCGACGAGCG CGCCTATACC 
CACGTCATCA CGCTGCAGCT CCCCGGCAGC AAAGAAACGG CCCTGATCCG CGATATTCAG 
ATGCACCCTT ATAAGGAGGA GGTCCTGCAC ATGGATTTCC TGCGCGTTCA CGCTGGCGAA 
CAGGTACGCT TGCATGTGCC CGTCCACTTC CTGAACGAAA GCACCTGCGC CGGCATCAAG 
GCAGGCGGGG TATTGCATCG CGCCCTGGTG GAAGTAGAAG TGGAAGCGCC GGTGGATCGC 
CTGCCGGAAG CCCTCCAGGT GGATATCGCC GGGCTGCACA TTGGTGATAG CCTGCATCTG 
TCCCAGATCA GTGTGCCCGC CGGCGTGACA CTGGTACCTT TGCTGCATGA GGACGACAAG 
GAAGTCGTCT CCATCCACAA TCCGCGTACC GGTGCCGAGG CGGAAGAGGC CCCGGAGACC 
GCCGCCTGA 

 

Protein sequence

MTDFAIAAQP REDIGRRASR RLRRTGMVPA VLYGDGKAAM GICIEARLLR KLLPDERAYT 
HVITLQLPGS KETALIRDIQ MHPYKEEVLH MDFLRVHAGE QVRLHVPVHF LNESTCAGIK 
AGGVLHRALV EVEVEAPVDR LPEALQVDIA GLHIGDSLHL SQISVPAGVT LVPLLHEDDK 
EVVSIHNPRT GAEAEEAPET AA