Gene AFE_2127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2127 
SymbolsecB 
ID7134869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp1881554 
End bp1882003 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content58% 
IMG OID643530496 
Productpreprotein translocase, SecB subunit 
Protein accessionYP_002426528 
Protein GI218666162 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAAC AGGAAGCAGT TTTCATGATC GAGCGCATCT ACGTGAAAGA CATCTCTTTT 
GAGTCGCCCA ACGCGCCCCT CAGTTTTGTG CAGACCGAGG CGCCGACCGT AGATGTGGGG 
CTGAACACCG CGAGCACCGT AGTGGAAGGG ATGGAAGGAC TTACCGAAGT GACGCTGACG 
GTGACCGTCA AGGCCAAGGC GGGTGAGAGC ACCTACTTTG CGGTGGAAGT TCAGCAGTCT 
GGTCTGTTCC GGGTTCAGAA CATCCCGGAA GAGCATATGC CCGCTCTGTT GGCCGTGCAT 
TGCCCGACCA TCCTGTTCCC GTATGCGCGG GAAGTGGTTG CGGATCTCGT CGGTCGCGGT 
GGTTTCCAGC CATTGCACCT GCACCCGGTG AATTTCGAGG CCCTGTATCA GCAGGCGCAG 
ACCCAGCAGC AGAACTATAC GACGCAATAA
 
Protein sequence
MDEQEAVFMI ERIYVKDISF ESPNAPLSFV QTEAPTVDVG LNTASTVVEG MEGLTEVTLT 
VTVKAKAGES TYFAVEVQQS GLFRVQNIPE EHMPALLAVH CPTILFPYAR EVVADLVGRG 
GFQPLHLHPV NFEALYQQAQ TQQQNYTTQ