Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2121 |
Symbol | |
ID | 7134469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1874502 |
End bp | 1875662 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643530490 |
Product | glycosyl transferase, group 2 family protein |
Protein accession | YP_002426522 |
Protein GI | 218668119 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | [TIGR03472] hopanoid biosynthesis associated glycosyl transferase protein HpnI |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.557939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCTGGT GGATAGGCGG CCCTGCGGCC CTGCTTTCCC TGGCGGCCGT GGTCTATCTG CTGTTGGCGC TTCGAGCAAT CGCGCGCTGG CATCCGGTAT TGCCGGAGCG CGATGCCGCC GTCAGCGGAG ATATCCTGTG CGACGGGCCC GGGGTCAGTG TGCTCAAGCC CCTGCATGGG GACGAGGGGG ATCTCTACGC CGCCTTGCGC AGTTTCTGCG TGCAGGACTA CCCGGCATTT GAAATCGTTT TTGGCGTGCA GCGCCCCGAC GATCCTGCCG TCACCGTGGT GCAGCGGCTG CAGGCCGAGT TCCCGGCCCT GGCGTTGCGC TGGGTGTGTA CGGAAGCGCG TATCGGCAGT AATCCCAAGG TCAATAATCT GGCGGGTATC CTCGCGCTCT GTCGTTACGA CACCCTGGTG ATCAGCGACG CGGATATTTC CGTCGGCCCC CATTACTTGC GCCAGATCTG TGCTTCCCTG CAAAACAGGG ATGTGGGGGT GGTGACCTGC CTCTATCGGG CCAGGCCCGT AGCCACCTTC TGGTCGCGGG TGCTGGCCGG TCAGGTGAAC GGTCTCTTTC TGCCCTCGGT GCTGCTGGCG GCGCGCCTGG GTCCGAACAT TTTCTGCGGC GGGGCGACCA TGGCCCTGCG TCGCCCGACG CTGGCGGCCA TCGGCGGCCT GCCACGCCTG GCAAACCAAC TGGCTGACGA TTACTGGCTC GGCGCCTACA GCCGCCAGTT GGGGCAAGCC ACCCTGCTCG CGGATTATGT GGTGGACACC GAGGTCCGGG AGGCGAATTT CCGCGCCTTT TACCAGCATG CGCTGCGCTG GTCGCGTACC ACGCGATCGG TACAGCCGCT GGGCCACACC TTTTCCTTTT TGACTTATCC GCTGCCCCTG GTGCTGCTGC TCGCGCCCTG GATGGGTCTC TGGGGCGGGG TGCCGCTGGG TGTGGTTCTC CTCTTGCGCC TCGTGTACCA TAGGCAAATT ATGCACAAAC TTAGTGCAGA CGGTTCGTTT GGTGTGGCCC TGCTGGGAGA GTTTCTGGGC CTGTGGATCT GGTTTCACGC CCTTTTCGCA CGGCACGTTG CCTGGCGGGG GTCGCAATTT GCCATCGGCG CCGACGGGCG GATGGATGGC CATGACGGAG CAAAACGATG A
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Protein sequence | MCWWIGGPAA LLSLAAVVYL LLALRAIARW HPVLPERDAA VSGDILCDGP GVSVLKPLHG DEGDLYAALR SFCVQDYPAF EIVFGVQRPD DPAVTVVQRL QAEFPALALR WVCTEARIGS NPKVNNLAGI LALCRYDTLV ISDADISVGP HYLRQICASL QNRDVGVVTC LYRARPVATF WSRVLAGQVN GLFLPSVLLA ARLGPNIFCG GATMALRRPT LAAIGGLPRL ANQLADDYWL GAYSRQLGQA TLLADYVVDT EVREANFRAF YQHALRWSRT TRSVQPLGHT FSFLTYPLPL VLLLAPWMGL WGGVPLGVVL LLRLVYHRQI MHKLSADGSF GVALLGEFLG LWIWFHALFA RHVAWRGSQF AIGADGRMDG HDGAKR
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