Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2120 |
Symbol | |
ID | 7136156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1873075 |
End bp | 1874505 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643530489 |
Product | radical SAM domain protein |
Protein accession | YP_002426521 |
Protein GI | 218667794 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | [TIGR03471] hopanoid biosynthesis associated radical SAM protein HpnJ |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.323478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATGA AAACCCTGTT CTTGCAAGCC CCTTCCTTTG AGGGATTCGA TGGTGGTGCC GGTTCGCGCT ATCAGGCCAA GCGGGAAATT CGCTCTTTCT GGTTCCCCAC CTGGCTGGCT CAGCCCGCCG CCATGATCCC TGGCAGCCGC TTGCTCGACG CCCCTCCCGC AGATGTCAGT GTCGAAGAAA CCCTGCAGGT TGCCGCAGGG TATGATCTCT GCATCATTCA TACCAGCACC CCGTCTTTTC CTTCCGATGT GCGTATGGCT GAAGTGCTCA AGGAGCACTA CCCGAAATTG CTCATCGGCA TGGTCGGCGC CAAGGTGGCG GTGGAGCCCG AGGAGTCTCT GCAGCAGGCC GCGGCGGCGG TCGACTTCGT GGCCCGCGAG GAGTTTGATT ACACCCTCAA AGAGATCGCC GAAGGTCGGC CCCTGAGTGA GGTGGACGGC ATCACCTACC GCTCCAGCAA TGGTCAGATC ATCCACAACC CCGATCGCGC CATGATCGAA GACATGGATG CCTTGCCCTT CGTCTCCGAA GTGTACAAAC GCGATCTGCA CATCGAGGAC TACTTCATCG GTTACCTCAA GCATCCCTAT ATTTCCTTCT ACACCGGACG CGGCTGCCGT TCACAGTGCA CCTTCTGCCT CTGGCCGCAG ACGGTGGGTG GCCATCGCTA TCGCACCCGC AGTGCCGCCA GCGTCATCGA AGAGGTGCGC TACATCCAGA AGAACTTCCC GCAGGTCAAG GAAATCTTCT TTGACGACGA TACGTTTACC GATGACCGTC CCCGTGCCGA AGAAATCGCC CGAGGTCTGG GCAAGCTGGG GGTGACCTGG TCCTGCAACG CCAAGGCCAA CGTGCCCTAC GATACCCTCA AGGTGCTCCA CGAGAACGGC CTGCGCCTGT TGCTGGTGGG CTATGAATCG GGCGATCAGC AGATCCTCAA CAACATCAAG AAGGGGCTCA AGGTCGAGGC GGCGCGCAAA TTCACGGCCG ACTGTCACAA GCTGGGGATC GTGATTCACG GCACCTTTAT TCTTGGCCTG CCGGGCGAGA CGAAGGAGAC CATTCAGAAG ACCATCGACT TCGCCAAGGA AATCAATCCC CATACCATAC AGGTGTCGCT GGCGGCGCCG TATCCCGGCA CCTTCCTGTA CAACCAGGCC AAACAGGAGG GGTGGCTGAC GGACGAAGAT GAGGCCCACC TGGTCAATGA CCGCGGCGTG CAGATCAGCC CCATGAGTTA CCCGCACCTC AACCATACGG AAATCTTCGA CTCGGTGGAG GTGATGTACA AGCGCTTCTA CTTCCGCGCC GGCAAGATTG CCGAAATCAC GGGTGAGATG CTCAAGAGCA CGCAAATGAT GAAACGTCGT TTGCGCGAAG GCGTGGAGTT CGTCCGCTTC CTCCGACAGC GCCACGGCTG A
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Protein sequence | MTMKTLFLQA PSFEGFDGGA GSRYQAKREI RSFWFPTWLA QPAAMIPGSR LLDAPPADVS VEETLQVAAG YDLCIIHTST PSFPSDVRMA EVLKEHYPKL LIGMVGAKVA VEPEESLQQA AAAVDFVARE EFDYTLKEIA EGRPLSEVDG ITYRSSNGQI IHNPDRAMIE DMDALPFVSE VYKRDLHIED YFIGYLKHPY ISFYTGRGCR SQCTFCLWPQ TVGGHRYRTR SAASVIEEVR YIQKNFPQVK EIFFDDDTFT DDRPRAEEIA RGLGKLGVTW SCNAKANVPY DTLKVLHENG LRLLLVGYES GDQQILNNIK KGLKVEAARK FTADCHKLGI VIHGTFILGL PGETKETIQK TIDFAKEINP HTIQVSLAAP YPGTFLYNQA KQEGWLTDED EAHLVNDRGV QISPMSYPHL NHTEIFDSVE VMYKRFYFRA GKIAEITGEM LKSTQMMKRR LREGVEFVRF LRQRHG
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