| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2117 |
|---|
| Symbol | |
|---|
| ID | 7136215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 1868497 |
|---|
| End bp | 1869513 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643530486 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002426518 |
|---|
| Protein GI | 218666093 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00374] conserved hypothetical protein
[TIGR03476] putative membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.836019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTGAAAC AGAAAGTGAT GATGCTGGCA GCCGGTCTGC TCGGTCTGGG TTTGGCCGTC
TTCCTGGTCG TGCATGCCGG GGTTTCCGAC ATCCTGAAAT TGCTGGCGGT GGCTGGCTGG
GGTCTGCTGT GGCTGCTCCC CCTTCACCTG TTGCCGCTGT CCCTGGACGT GTTGGGCTGG
AAGTGGCTGC TGCGCGGTGA GGCGCGCGTC CGTTTCTGGT TTTTGCTATG GGTGGCGCTG
GTCCGCGAAG CGGCCAACGG CCTCCTGCCG GTGGCGCGGG TGGGTGGAGA AGTGCTCGGT
GTACGCCTCC TGACATACTA CGGCGTGCCC GGCTATGTCG CCGGGGCCAG TGTCATGGTG
GAAGTCACCC TGACCCTATT GAGCCAGTTC ATCTTCACGC TGGCGGGGTT CGTGGTGCTG
ATTTTCGCGG TCAGTGACCA CCATCTGCAA TTCCAGGTGG TATTTTTTCT GGCATTGATC
CTGCCGTTGC TCATGGCCTT TATCTGGTTG CAATATCGTT GGGGACTGTT CACGGTTCTG
CAGATGCTGA TGAAGAAACT TCTGGGCGGT AAGGACCTGC TTGCGCTCAT AGGAGAACCC
CAGCGTCTGG ATGCCGAAAT CCGTCGGCTC TATGCACGTC GCTGGGGTCT GCTCCCGGCG
AATGTCTGGC AACTGAGCGG TCTGTTGGCG GGCACGGCGG AAGTCTGGTT TACCTTCTGG
CTGCTGGGCC ATCCTCTCCC TTTCTGGGCA GCGCTACTCC TGGAAAGCCT CGGGCAGGCC
CTGCGCAGTA TGGCGTTTCT GGTGCCGGGC GGACTGGGTG TGCAGGAGGG CGGCTTCATT
CTGTTCGGCA GCGCGATCGG TGTCGGGCCT GATCTGGCAC TGGCCTTTTC TCTGACACGC
CGCTTCCGCG AAACCCTGAC GGGCATTCCG GTACTCTTGT CATGGCAAGC ATTGGAAGGC
CATCATATGC ACCGCCAGTG GCGGCAAATA CGTTCCAACA GGGAGGGCAT TTCATGA
|
|---|
| Protein sequence | MLKQKVMMLA AGLLGLGLAV FLVVHAGVSD ILKLLAVAGW GLLWLLPLHL LPLSLDVLGW
KWLLRGEARV RFWFLLWVAL VREAANGLLP VARVGGEVLG VRLLTYYGVP GYVAGASVMV
EVTLTLLSQF IFTLAGFVVL IFAVSDHHLQ FQVVFFLALI LPLLMAFIWL QYRWGLFTVL
QMLMKKLLGG KDLLALIGEP QRLDAEIRRL YARRWGLLPA NVWQLSGLLA GTAEVWFTFW
LLGHPLPFWA ALLLESLGQA LRSMAFLVPG GLGVQEGGFI LFGSAIGVGP DLALAFSLTR
RFRETLTGIP VLLSWQALEG HHMHRQWRQI RSNREGIS
|
|---|
| |