Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2110 |
Symbol | gatB |
ID | 7137257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1861698 |
End bp | 1863134 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643530479 |
Product | glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, B subunit |
Protein accession | YP_002426511 |
Protein GI | 218665662 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.114384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATGG ACTGGGAAGT CGTCATCGGC TTGGAAGTTC ACGCCCAGCT CAATACCGCC ACCAAAATAT TTTGCGGCTG TCCGACCGCT TTCGGGGCGG AGCCTAACAG TCACACCTGC CCGGTCTGCC TAGCCATGCC CGGTGCCCTG CCGGTTCTCA ATGCGGCAGC GGTGGATAAG GCTATCGCTC TAGGGCTGGC GATTGGCGCG GAGCTGAATC GGCACAGTAT TTTTGCCCGC AAGAACTACT TTTACCCCGA TTTGCCCAAG GGCTATCAGA TCAGCCAGTA CGAACTGCCC GTCGTCGGCA AGGGGACACT GACGGTGCAA CTGCCTGACG GTGGGGAAAA AGTGGTGGGT GTGACCCGCG CGCACCTGGA AGAAGACGCC GGTAAATCAC TTCACGAAGC CTTTATCGGG CAGTCCGGTA TCGACCTGAA CCGTGCGGGC ACGCCGCTGC TGGAAATCGT GTCGGAGCCG GATATGCGCT CGTCGGCGGA GGCTGTGGCC TATCTCAAAA AACTGCATAC CCTGGTGCGT TATCTGGATA TTTGTGACGG CAATATGCAG GAAGGTTCCT TTCGTTGTGA TGCCAACGTC TCCCTGCGGC GGCCGGGCGC CCCCTATGGA ACCCGTGCCG AGATCAAGAA TCTCAACTCT TTTCGGTTTC TGGAAAAGGC GATCGAATAT GAGATCGGTC GCCAGCGCGA TATCCTGGAG AGCGGCGGGC AGATTGTGCA GGAAACACGT CTCTATGACG CCAACCGCGA CGAAACCCGC TCCATGCGCG GTAAAGAAGA GGCCAACGAC TACCGTTATT TTCCTGACCC TGACCTGCTG CCATTGGTGC TGGACGAGTC GCGTATCGAG CGGGTGCGGG AGACCCTCCC GGAGTTGCCC GATGCCAGGC GTATCCGGTT TATGAGGCAG TATGCCCTTC CGGTCTATGA CGCCGGCGTG CTCACCGCCG GCCGTACCCT GGCGGATTAC TACGAGCAGG TAGCCGTCGA TGTGGATGGT AAACTGGCGG CGAACTGGGT CATGGGCGAC CTGCTCGGGG CCCTCAACAA GGCGAGTATT GAGATTGAGG ACTGCCCGGT TTCTGCAGAA AAATTGCGTC TGCTGGTTCA ACGTATCGAG GACCAGACGA TCTCTGGCAA GATCGCCAAA GAAATCTTTG AAGAGATTTT CTATCGCGGT GGCGAGGTGG ACGCCATCAT TGAGGATCGC GGTTTGCGGC AGATCACCGA TGTGGCGGCT ATTGCCGCAA TGGTGGACGC CATTGTCACG GCCAATCCGC AGCAGGCGGC TGACTTTCGC GCCGGGAAGG ACAAGCTACT GGGCTTCTTC GTGGGTCAGG TGATGAAGGC TAGTCAGGGA AAAGCCAATC CTGATCAGGT AAACGCTATT TTGCTGGAGC GTTTGCAGAA AGGTTAG
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Protein sequence | MNMDWEVVIG LEVHAQLNTA TKIFCGCPTA FGAEPNSHTC PVCLAMPGAL PVLNAAAVDK AIALGLAIGA ELNRHSIFAR KNYFYPDLPK GYQISQYELP VVGKGTLTVQ LPDGGEKVVG VTRAHLEEDA GKSLHEAFIG QSGIDLNRAG TPLLEIVSEP DMRSSAEAVA YLKKLHTLVR YLDICDGNMQ EGSFRCDANV SLRRPGAPYG TRAEIKNLNS FRFLEKAIEY EIGRQRDILE SGGQIVQETR LYDANRDETR SMRGKEEAND YRYFPDPDLL PLVLDESRIE RVRETLPELP DARRIRFMRQ YALPVYDAGV LTAGRTLADY YEQVAVDVDG KLAANWVMGD LLGALNKASI EIEDCPVSAE KLRLLVQRIE DQTISGKIAK EIFEEIFYRG GEVDAIIEDR GLRQITDVAA IAAMVDAIVT ANPQQAADFR AGKDKLLGFF VGQVMKASQG KANPDQVNAI LLERLQKG
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