| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2104 |
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| Symbol | |
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| ID | 7135881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1855079 |
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| End bp | 1858183 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643530474 |
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| Product | transporter, AcrB/AcrD/AcrF family |
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| Protein accession | YP_002426506 |
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| Protein GI | 218667070 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTAT CGGCACCCTT TATTCGTCGC CCCGTCGCCA CAACAGTACT CGCAGTAGCC
GTGGCCTTGC TGGGTTTATT TGCCTACTTG CAATTACCCA CGGCTTTACT TCCCAACGTC
AGCTTTCCGA TGGTGATGGT CACCGCAGAA CTCCCGGGAG CCAGCCCCAA AACCATGTCC
AGCGCGGTAG CCACCCCACT GGAAAGGCAA TTTGCCAGCA TTCCCGGCCT CAACTCCATG
AGTGCCGTCA GTCAAAACGG AGTGACCCAG ATCACCCTGC AGTTCGATCT CAGCAAATCC
CCGCTGGGTG CCACCCAGCA AGTTTCCAAC GCCGTTTCCC AGGCTCAGCA TTTTTTACCA
CCGGGCATGC CCGAGCCGCC TTCGGTCCGG CAAATGAATC CTTCGGCCCA GCCCGTTTTT
TATATTGGCA TGTCTGCTCC CAACATGCCG CTTTATGATC TGGACAAATA CGCTCAAACC
AAGGTCAGCA CGGCATTATC AGGTATATCC GGGGTATCTG ACGTGCAAAT TTACGGGGCG
CAAACCTACG CCGTGCGCAT TTATGTGAAT CCTTTTGCCC TTTCTGCCCG GGGCCTGAGT
CTGCAGGCCG TACAAAGCGC CCTGGGTAAT GCCAACGTCA ACCTGCCCGG TGGCACCCTG
GATGGGGGTG ATCAGGCTTT CGCCACCCAG GTACACGGTC AGTTACATAC CGCAGAAGCC
TACAACCATC TGGTTCTGGC CTATGAGGGC GGACAGGCGG TTCCCCTCAG TGCGGTTGGC
AAGGCCGTCA ACAGTACCCA GGATAACCAA CAGGAAACCT GGATCAACAA AACTCCCGGT
ATTGTTCTCG CTGTAACACG ACAGCCAGGC AGCAATACCG TCGCCATTTC CAACAAAATC
CGCGCCATGT TGCCGCAATT GCAGGCTGCC ATGCCCGGCG GGGTGCATCT GACCAATGTT
TTCGATTTGG CCGATTACAT TCGCGCGGCG GTACACGAAG TACTGATGAC CCTCATCCTC
GCCAGCATTC TGGTAGCAGG CGTCATGTGG CTGTTTCTGC GCCGCCCCTC GGCCACCCTC
ATCGGCGCAG TCGCCATACC CCTTTCCTTG CTGGGTACCT TTCTGGTCAT GATGCTGCTC
GGCTTCAGTA TCAATACCCT GACCTTGCTG GCGCTGACTC TTTCGGTGGG CTTTGTGGTG
GATGATGCCG TGGTGATGCT GGAAAACATC AACCGACACA TCGACCGGGG AGAAACCGGC
ATGACTGCCG CCCTCAATGG CAGCCGGGAA ATCAGTTTTA CGGTCCTGTC CATGACCTTG
TCCCTGTCCA TCATTTTTCT TCCTCTGATT TTTCTGGGTG GCTTTGTCGG CCATTTGTTC
TCGGACTTTG GGGTCAGTAT TGCCGTGGTC ATCCTGATTT CCGGGATGGT CGCCCTGAGC
GTCACGCCCA TGCTTTGCAG TCGTTATCTC AAACCCAATC ACGCCCATAC CCCGACCGAC
CTGCACGATA CCGGTCACTT GCCTGAAGAC GGGATTTTTC AGCGATTTTT CAAGGGCAGT
CGCGATTTTT ATATTCGCAC CCTGAAAGTT GCCTTGCAGC ACAAATACTG GATGCTGGCC
CTGGCTGGAC TTTCACTGGC GGGTAGTGTC TGGCTGGTAA TGATTGTTCC CAAGGCTTTT
TTACCTAGCC AGAACTCGGG AATGATCAAT GCCAATATTG AATACCCTAC CGGGATGACC
TTTGCAGAAG TCAGCCATGA GCAGTCAGAA ATCGCCCGGG TGGTGAAATC CAATCCACGT
ATTCAATCGG TGGTGTCTTC TGCTGGACAA GGGCCCGGCG GTTTCGGTAG CAGCACTTCG
GGACACATGT TTATTCACAT TCGCAATGGG TACGCGCCAG AAACGGAAGA AATCATCGAG
GATCTCAACC GTGCCACACA GGGCTTCCAC AATGCCCAGG TTGTATTCCA AGGACCACAG
AGCGCCCACT CAGGTACCGC GAGTGATAAT GGCAGCTACG TTTATGAACT CATTGGCAAC
AACTGGACCG ACCTCAACGC CGCCACCCTG AGAATGACCG CAGCGCTACG CCGTTTGCCG
CAACTCAGCT CCGTCAGCAA CAGCCTGCAA AACAATAACC CCCAGGTGGC CATCAAAATC
AACCGGCCCT GGGCCACGGC CCTCGGCGTT ACTCCGGCCG CCATTGAAAA CACCCTCGGT
CTCGCCTTCG GTGGCCATGA GGTAGGAACG ATTTATGGTG CCAATGACCA ATATGAAGTC
ATTATGGAAC TCGAACCCCG CTATCAACAC AACATCAATG CCCTCTCGAC CCTCAGCGTA
GCAGGGGCTG GGGGCACGCT GGTACCGCTC TCGGCGGTGG CAGAATTTCA TTACGATGCC
GCTCCCCTCA CCCTGATGCA ACACAACGGT CAGCCCTCAA CCACGATCTC CTTCAATCTC
GCGCCGGGGG CCAACCTCGG CCGCGCCATT TCCGCACTGC AGAGTAAAGC CAAGGACATA
TTGCCCGCCG GGATCGCCGG CCATCTGGGC GGCACTGCGG CGCAATTCCA GTCCGCTTTC
AAATCGTTGC CATTTTTGTT GTTGGCCACC GTACTGCTCA TTTATGTAGT GCTGGCCATT
CTCTACGAGC ATTTTCTGCA TCCTCTGACC ATTCTGACCG CCTTGCCCCT GGCGGCTTTC
GGAGCCTTGC TGTCATTGGT TATTTTTAAC GAGCCCCTCG AGTTGTACAG CTTCATCGGC
ATCATCATGC TGCTCGGGCT GGTCAAGAAA AACGGCATCA TTCTCGTCGA TTTTGCGGTC
AGTCGCCGTC GCGAAGGCGC CAGTGCCTAT GAGGCCATCG TCGATGCCTG CACAATCCGC
TATCGCCCCA TCATGATGAC CACTTTTGCC GCCATCCTTG GTGTACTTCC CATTGCCATC
GGCTTTGGCG CCGGCGCAGA TAGCCGGGTA CCCTTGGGCA TCGCCGTAGT CGGTGGCCTG
ATATTTTCCC AGTTTTTGAC ACTTTACATT ACACCCGCTT TTTATTTATT TTTTGATGAA
TTACAAGCGG CTCCCAAGTA TTTCAACTGG TTATTTGGGC GTTAA
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| Protein sequence | MNLSAPFIRR PVATTVLAVA VALLGLFAYL QLPTALLPNV SFPMVMVTAE LPGASPKTMS
SAVATPLERQ FASIPGLNSM SAVSQNGVTQ ITLQFDLSKS PLGATQQVSN AVSQAQHFLP
PGMPEPPSVR QMNPSAQPVF YIGMSAPNMP LYDLDKYAQT KVSTALSGIS GVSDVQIYGA
QTYAVRIYVN PFALSARGLS LQAVQSALGN ANVNLPGGTL DGGDQAFATQ VHGQLHTAEA
YNHLVLAYEG GQAVPLSAVG KAVNSTQDNQ QETWINKTPG IVLAVTRQPG SNTVAISNKI
RAMLPQLQAA MPGGVHLTNV FDLADYIRAA VHEVLMTLIL ASILVAGVMW LFLRRPSATL
IGAVAIPLSL LGTFLVMMLL GFSINTLTLL ALTLSVGFVV DDAVVMLENI NRHIDRGETG
MTAALNGSRE ISFTVLSMTL SLSIIFLPLI FLGGFVGHLF SDFGVSIAVV ILISGMVALS
VTPMLCSRYL KPNHAHTPTD LHDTGHLPED GIFQRFFKGS RDFYIRTLKV ALQHKYWMLA
LAGLSLAGSV WLVMIVPKAF LPSQNSGMIN ANIEYPTGMT FAEVSHEQSE IARVVKSNPR
IQSVVSSAGQ GPGGFGSSTS GHMFIHIRNG YAPETEEIIE DLNRATQGFH NAQVVFQGPQ
SAHSGTASDN GSYVYELIGN NWTDLNAATL RMTAALRRLP QLSSVSNSLQ NNNPQVAIKI
NRPWATALGV TPAAIENTLG LAFGGHEVGT IYGANDQYEV IMELEPRYQH NINALSTLSV
AGAGGTLVPL SAVAEFHYDA APLTLMQHNG QPSTTISFNL APGANLGRAI SALQSKAKDI
LPAGIAGHLG GTAAQFQSAF KSLPFLLLAT VLLIYVVLAI LYEHFLHPLT ILTALPLAAF
GALLSLVIFN EPLELYSFIG IIMLLGLVKK NGIILVDFAV SRRREGASAY EAIVDACTIR
YRPIMMTTFA AILGVLPIAI GFGAGADSRV PLGIAVVGGL IFSQFLTLYI TPAFYLFFDE
LQAAPKYFNW LFGR
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