| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2103 |
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| Symbol | |
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| ID | 7136498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1853988 |
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| End bp | 1855082 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643530473 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002426505 |
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| Protein GI | 218665510 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.108678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTCCC TGCCCGTAAA ATCCCTGTTG CTTCCCGTTG CGGCAGCCCT GATCCTGGCG
GGCTGCGCCC AGCATAAGCC GCCCCACAAA AACACGGCGC TGCCCGTGGA AACTGCGACG
GTGCAGACCG GCAACCTGCC CATTGTGGTC AACACCCTGG GGCAAGCAGT GGCGTCCCAT
AGTGTCACCA TCACCCCACA GGTAAGCGGC ATTTTGCAAA AGGTTGCCGT CCACTCGGGG
CAAGTGATTC AAAAAGGCCA GCTTCTATTC CAGATTGACC CTGCCACACC GGGTGCTCAG
GTGGCTGAAG ATCGAGCCAA TCTGCAGGGT GAAATCGCTC AGCAACAATA TGATGACGCG
CAGGTCAAGG CTTATGCGCC TTTGCTCAGC AAGGATTATG TCACCCGTCA GACGGTCCAG
CAGGCACAGG CACAGGCCAA CACGGCGGCC GCCACCGTGG CCGCTGATCA GGCGGCGCTG
CAGGCCGCCC GGATTACCCT GGCTGAAACC CGGATTACCG CCCCCATCAG TGGTAGTGTG
GGAATCCTGA GTCTCAAATC CGGTAACCTG GTCACCGCCA ACAGCACGCA ACTGGTAACC
ATCAATCAGA TTCAACCCAT CTACGTGCAA TTCAGTCTGC CTGAAACCTA TCTCAACGAT
TTACATACCG CCATTAGCGA TTACTCCGGC AAGGTGGACG TCTGGGATGA GAACCATCAG
ACCCGGATCG GCACCGGGAC GGTCACGGTG ATTGATAATA CCGTCAACAC GGCTTCAGCG
ACGGTTACGG CACGCGCCAC TCTCAGTAAT CAACCAGCCC GGCTCTGGCC CGGTGAATAT
GTGCAGGTGG ATTTCACCGC TCAAGAGCTC CACCATGCCC TGATCATTCC CGCAACTGCC
TTACAGCAGG GTGTCTCCGG CTCTTTTGTC TATACCATAA AAAAAGACAA GGCTGTCATG
CAGGCCGTGC AATTTTTGGG GCAGAACGGT AAGCAGGTTG CCATAGCCGG AAGCCATTTA
TTGGGAGACA GCGTGATTGT GGGGGCGCCG ACCCGGCTTC ATCCCGGTTC TGAAGTGCGC
GTGATCAAGC CATGA
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| Protein sequence | MRSLPVKSLL LPVAAALILA GCAQHKPPHK NTALPVETAT VQTGNLPIVV NTLGQAVASH
SVTITPQVSG ILQKVAVHSG QVIQKGQLLF QIDPATPGAQ VAEDRANLQG EIAQQQYDDA
QVKAYAPLLS KDYVTRQTVQ QAQAQANTAA ATVAADQAAL QAARITLAET RITAPISGSV
GILSLKSGNL VTANSTQLVT INQIQPIYVQ FSLPETYLND LHTAISDYSG KVDVWDENHQ
TRIGTGTVTV IDNTVNTASA TVTARATLSN QPARLWPGEY VQVDFTAQEL HHALIIPATA
LQQGVSGSFV YTIKKDKAVM QAVQFLGQNG KQVAIAGSHL LGDSVIVGAP TRLHPGSEVR
VIKP
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