| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2082 |
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| Symbol | |
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| ID | 7134650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 1833984 |
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| End bp | 1835840 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643530453 |
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| Product | alpha-amylase family protein |
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| Protein accession | YP_002426485 |
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| Protein GI | 218667240 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCCGCC ACGACATGCC TTTCGGCGCC CAGCGCCTCG AAGACGGGCG CTGGCGGTTC
CGGCTCTGGG CACCTGCGGC GGGAACGGTG GAACTCCAGC TCCCGCACGG CACAGGGGTA
CGGTACACGC CTATGCGGCC GGAGACCGAG GGTTGGTTCG CGCTGGAAAC GGGGGCGGCT
CCGGGGACCG CTTATGCCTA TCGCATCAAT AGGGACCTCG TCGTCCCGGA CCCCGCATCC
CGCGCCCAGC TCGACGATGT TCACGGCCCG AGCCTGCTGG TGGACCCCGC TGCCTTTGCC
TGGGAAGACG GCCATTGGCG GGGGCGGCCC TGGGAAGAGG CCGTGATCTA CGAGCTGCAT
ACCGGCACCT TCTCGTCCGA GGGCACTTTC GGCGGGATCA CCGCGCGCCT GGACCAGCTG
GCCGGGCTGG GCGTCACGGC CCTGGAGCTC ATGCCCGTGG CGGACTTTCC CGGCGAGCGG
GACTGGGGCT ACAACGGGGC GCTGCCCTTC GCGCCGGATC GGCGCTACGG CACGCCCGAC
GACCTGAAAC GCCTGGTGCA GGGAGCTCAC CGGCGTGGCC TCATGGTATT CCTCGACGTC
GTGTACAACC ATTTCGGACC CGTGGGAAAT TATCTGTCCC ATTACGCCCC CGCCTTCTTC
ACCGACCGCC ACCACACCCC CTGGGGGGCG GCCATCAATT TCGATGGCCC CGGAAGCCGC
ACGGTGCGCG CGTTTTTCAT CCACAACGCC CTGTACTGGC TGGAAGAGTT TCACATGGAC
GGCCTGCGCC TCGACGCCGT GCATGCCATC TGCGACGACT CGGACCCGGA CATCATCGAG
GAGCTGGGCG CGGCGGTCGC CCGGCGCTTT CCGCACCGCC CCATACACCT GATGCTGGAG
GATGACCGCA ACAGCGCCCA CTACCTGGTC CCGGAGGGTT CACGGCGCAT ATATGCCGCC
CAATGGAACG ATGATTTCCA CCACGCCCTC CACGTCATCC TGACCGGTGA GGCGGAGGGC
TACTACGGGG ACTTCGCCGA CGATCCCCAT GGGCTCCTCG CCCGCTGCCT GGCCGAAGGC
TTCGCCTTCC AGGGTGCCTG GTCCGTCTAC CACGGGCGGC GCCGCGGCGA GCCGAGTGCC
GGTCTCCCGG TCACCGCCTT CATCGGCTTT CTCCAGAACC ACGACCAGGT GGGCAACCGG
GCCTTCGGCG ATCGTCTGGC GACCCTCGCA ACGCCGGAGG CCGTGCGGGC GGCGACGGTG
CTGCTGTTGC TGGCGCCGGC CCCGCCATTG CTCTTCATGG GCCAGGAGTG GGGCAGCCGG
CGCCCATTCC CGTTCTTCTG CGACCTGGGA CCCGACCTCG CGCCGCAGGT GCGGGAAGGC
CGGCTGCGCG AGTTCGCACG CTTCCCGGAC TTCGCCGACG CCGCTGGCCG CGCCCGCATC
CCCGATCCCA GCGACCCGGC GACCTTCCGG TCCGCCCGGC TCGACTGGCG CGAAAGGGAG
CAGGAAACGC ACCGAGCCTG GCTGGCCCTG CATCGCGAGC TGCTCGCCCT TCGCCAGCGC
GAGCTGGTGC CGCGTCTGGC CGGCGTCACC GTGGAGGGGG CGGTGGCGGC CCATTTCGGC
AAAGGCGGCG TGACGGCACG CTGGCGCCTC GCCGATAGGA TCGTCCTGGT GGTCGTCGCC
AACCTGGACG CGGAGCCGGC CGCCCACCTT CGCCTTCCCA CCGGCAAGCA GCTTTACGCC
ACACCAGCGG CATCCGGACC CGACGGCTCC TTCGCACCCT GGGCGGTGGC TTTCTTCCTG
TGTGCCCCCC ATGACGCCGA GGTCGCCGTG GACGGAACAT CGCCGTTCGG CCACTGA
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| Protein sequence | MCRHDMPFGA QRLEDGRWRF RLWAPAAGTV ELQLPHGTGV RYTPMRPETE GWFALETGAA
PGTAYAYRIN RDLVVPDPAS RAQLDDVHGP SLLVDPAAFA WEDGHWRGRP WEEAVIYELH
TGTFSSEGTF GGITARLDQL AGLGVTALEL MPVADFPGER DWGYNGALPF APDRRYGTPD
DLKRLVQGAH RRGLMVFLDV VYNHFGPVGN YLSHYAPAFF TDRHHTPWGA AINFDGPGSR
TVRAFFIHNA LYWLEEFHMD GLRLDAVHAI CDDSDPDIIE ELGAAVARRF PHRPIHLMLE
DDRNSAHYLV PEGSRRIYAA QWNDDFHHAL HVILTGEAEG YYGDFADDPH GLLARCLAEG
FAFQGAWSVY HGRRRGEPSA GLPVTAFIGF LQNHDQVGNR AFGDRLATLA TPEAVRAATV
LLLLAPAPPL LFMGQEWGSR RPFPFFCDLG PDLAPQVREG RLREFARFPD FADAAGRARI
PDPSDPATFR SARLDWRERE QETHRAWLAL HRELLALRQR ELVPRLAGVT VEGAVAAHFG
KGGVTARWRL ADRIVLVVVA NLDAEPAAHL RLPTGKQLYA TPAASGPDGS FAPWAVAFFL
CAPHDAEVAV DGTSPFGH
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