| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2081 |
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| Symbol | |
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| ID | 7135678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 1831069 |
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| End bp | 1833978 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643530452 |
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| Product | alpha-amylase family protein |
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| Protein accession | YP_002426484 |
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| Protein GI | 218666940 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3280] Maltooligosyl trehalose synthase |
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| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCCTG ATCCCATTCC CCGCGCAAGC TACCGGCTCC AGTTCAATCG CCAATTCACC
TTCGACGATG CGGTGGCCCT CGTGCCCTAT CTGCAGGAAC TGGGCGTGTC CCATTGCTAC
GCATCCCCCT ACCTCAAGGC CCGCAGTGGC AGCCCGCACG GCTACGACAT CGTCGACCAC
AACGCCCTCA ACCCCGAGAT CGGCGACGAC CGGAGCTTCG GTCGCTTTGT CACCGCCCTC
GCTCGCCATG GCTTGGGCCA TATCCTGGAC TTCGTACCCA ACCACATGGG CGTGGGCGGT
GACGACAACG CCTGGTGGCT GGATCTGCTG GAAAACGGCC AGGCATCCCC CTACGCGGAT
TTCTTCGATA TTGACTGGCA TCCCCACGAG AAGGCGCTGC GCGGCAAGGT CCTGGTTCCC
TTCCTGGGCG GCTACTACGG CGACCTGCTC GAAAACGGCG AGTTGCATCT GGCCTTCGAC
GCGCAGCGAG GGGAGTTCAG CGTCTGGTAC CTGCAGCACC GCTTCCCGCT GGATCCGCGT
ACCTATCCCG GCATCCTTGA ATATGGGCTG GAACGGTTGA AGGAGCGGTT GGGCGCCGAC
CAGCCCAGGC TGGCCGAATA CCAAAGCCTC AGCACCGCCT TCACCCATCT CCCCGCGCGC
CGAGAGACGG CGGCCGCCAA ACTGGAGGAG CGGCGCCGCG ACAAGGAGGT CCACAAGCGC
CACCTGGCGG AGCTCTGCAC CGCCGAACCC CGGATCGGGG CCTTCATCGA AGAGAACGTG
GCATCCCTGA ACGGCGAGCC GGGCGAGGTG GCCACCTTCG ACCGGCTCCA CGAGGTCCTG
GAAGGGCAGG CCTACCGCCT CGCGTATTGG CGGGTCGCCG CGGACGAGAT CAATTATCGC
CGCTTTTTCG ACATCAACGA CCTCGCCGGC CTGCGGATGG AGCGGCCCGA GGTGTTCGCC
GCCACCCATC GCCTGGTGCT CCAACTGGTG GCCGAGGGCA AGCTGGACGG CCTGCGCATC
GACCATGCCG ACGGTCTGTA CGACCCAGCC GGCTATTTCA CGCGGCTCCG GATGGAGATC
CATGCGGCGC TGGCGGAGCG GGCCGAACCA GCGGGCGGCG GCACGGCCCC CGATTTCTAC
CTCGTGGCGG AAAAGATCCT GATCGGTCCG GAACGGCTGG TGGACGGCTG GCCGGTGCAG
GGGACCACCG GCTATGACTT CGCCAACGCG GTCAACGACC TCTTCGTCAA CCCGGCGGCG
CAGCGGGACT TGGATCGCAT TTATGCCCGA TTCATCGGAC AACGCGGCGA TTTCGCGGAA
ATGCTCTTCC AATGCAAGCA ACTGGTCATG GAGGCGCAAC TCTCCTCGGA ACTCACCATG
CTCGCCGACA TGCTCGACGG CATCGCCCAA AGCGACCGGC ACACCCGCGA CTTCACCCGT
AACGGCTGCC GCGGCGCCGT GGCCATGCTC GTGGCCTGTT TCCCGGTGTA CCGTAGCTAT
ATCGCCGCCA ATCGGGTCTC CGAAGACGAC CGCCGCTACG TGGAAGCGGC GGTGGCACAG
GCAAAAAAAC GCAGCCCGGG GGACGTGAGC ATCTTCGACT TCATCCGCCG CATCCTGTTG
GAAGACACCG GCGCGCCGGA GGCCTCGCGG CGCCGGCGGG CGGCCCGCTT CGCCTTGAAA
CTCCAGCAGT ACACGGCCCC GGTCATGGCC AAGGCCCAGG AGGACACGGC CTTCTACCGC
TATCACCGGC TGGTGTCCCT GAACGAGGTC GGCGGTGACC CGCGACGTTT CGGGACCACT
CCGGCCGCCT TTCATCGCGC CAACCAGGAA CGGGCCCAGA AATGGCCATA CGCCATGCTG
ACGACCTCCA CCCACGACAC CAAACGCAGC GAGGACGTGC GGGCCCGCAT CGACGTCCTC
TCCGAACTCA CCGACGAATG GCGGAAAAGG GTGGGACGTT GGGCGCGCTT CGCCCGCCGG
CACAAGCGGA TGGTGGATGG CATTCCGGCA CCGAGCCGCA ATGACGAGTA CCTGTTCTAC
CAGACCCTGC TCGGCGTCTG GCCCCTCGAA TCCCCTGGCG AGCGCGCCTT CGACGATCTC
CGTGAGCGGG TCCTGCGTTA TATGCTCAAG GCAGTGAAGG AGGCCAAGAC CCACACCTCC
TGGCTGAACC CCAACCTTGC TTACGAAGAG GCCCTGGATT ACTTCGTCAT GGCCATGCTC
GACCGCACCG GCCGCAACCC CTTCCTCGCC GATTTTCTCC CGTTCCAGGC CCGAGTCGCC
CGCTTCGGGC TGTGGAACGG CCTGTCCCAG CAGCTATTGA AGCTTACGGC GCCGGGCGTA
CCCGACATCT ACCAGGGGAC CGAAGTGTGG GACTTCAGCC TCGTGGACCC GGACAACCGC
CGCCCCGTGG ACTACCGGCG CCGGCGGGAC CTGCTGCACC GGCTGAGGGC TGTCGCCCGC
GGGCGGGACG GAGCGCGCCT CGCGCAGGAT CTGATGGAGC ATCCGGAGGA CGGTCGCGCC
AAGCTCTTTG TCACTTGGCG GGCACTGGAG GCGCGGCACC GATTCCCCGA GGTCTTTGCC
GGCGGCGCCT ACCTACCCCT TGCCGTCACG GGTGCCCAGG CCGACCACGC AGTGGCCTTT
GCACGGCAGG CGAACGGGCG CACCGTGATC ACCATCGCCA CCCGCTGGTT CGCCACCCTC
CTCGGCGACG AAAAACGCCT GCCGGTAGGT GAGGCGGTAT GGACCGATAC CGGGATCGAG
CTCCCCAACC CGGCCGCGGC ATGGGAAAAC CTGTTCACGG GCGAGACGGT GCGCCCCGAT
GCCGCCGGAG ACAAGCCTCG CCTTTCTCTT GCCCGGACGT TGGCTTGCTT TCCCGTCGCC
CTGCTGGTTC CGGCGGAGGT CGGCTCGTGA
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| Protein sequence | MAPDPIPRAS YRLQFNRQFT FDDAVALVPY LQELGVSHCY ASPYLKARSG SPHGYDIVDH
NALNPEIGDD RSFGRFVTAL ARHGLGHILD FVPNHMGVGG DDNAWWLDLL ENGQASPYAD
FFDIDWHPHE KALRGKVLVP FLGGYYGDLL ENGELHLAFD AQRGEFSVWY LQHRFPLDPR
TYPGILEYGL ERLKERLGAD QPRLAEYQSL STAFTHLPAR RETAAAKLEE RRRDKEVHKR
HLAELCTAEP RIGAFIEENV ASLNGEPGEV ATFDRLHEVL EGQAYRLAYW RVAADEINYR
RFFDINDLAG LRMERPEVFA ATHRLVLQLV AEGKLDGLRI DHADGLYDPA GYFTRLRMEI
HAALAERAEP AGGGTAPDFY LVAEKILIGP ERLVDGWPVQ GTTGYDFANA VNDLFVNPAA
QRDLDRIYAR FIGQRGDFAE MLFQCKQLVM EAQLSSELTM LADMLDGIAQ SDRHTRDFTR
NGCRGAVAML VACFPVYRSY IAANRVSEDD RRYVEAAVAQ AKKRSPGDVS IFDFIRRILL
EDTGAPEASR RRRAARFALK LQQYTAPVMA KAQEDTAFYR YHRLVSLNEV GGDPRRFGTT
PAAFHRANQE RAQKWPYAML TTSTHDTKRS EDVRARIDVL SELTDEWRKR VGRWARFARR
HKRMVDGIPA PSRNDEYLFY QTLLGVWPLE SPGERAFDDL RERVLRYMLK AVKEAKTHTS
WLNPNLAYEE ALDYFVMAML DRTGRNPFLA DFLPFQARVA RFGLWNGLSQ QLLKLTAPGV
PDIYQGTEVW DFSLVDPDNR RPVDYRRRRD LLHRLRAVAR GRDGARLAQD LMEHPEDGRA
KLFVTWRALE ARHRFPEVFA GGAYLPLAVT GAQADHAVAF ARQANGRTVI TIATRWFATL
LGDEKRLPVG EAVWTDTGIE LPNPAAAWEN LFTGETVRPD AAGDKPRLSL ARTLACFPVA
LLVPAEVGS
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