Gene AFE_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2079 
Symbolnuc 
ID7135047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp1828313 
End bp1828954 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content61% 
IMG OID643530450 
Productendonuclease 
Protein accessionYP_002426482 
Protein GI218667190 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGAG TGAAGCGGTC GAGCATTATG CCGGTTTGTG GACTGTTGCT GGCGTTTTTT 
GCGGCAGGGG CACAGGCCGA TGGATCCGGC TGGCAATGGC TGAAAAGCTG GGGGCAAAAT 
CAGTGGTCAG CGGCCACCGC CGCACTGCCG CACACGCCCG TAACGGTGCC AGCGCAGGGG 
ACGATCGAGG TGGCGTTCTC GCCGCCAGGC GGGGCGACGG CGGCCATTGT GCAGGCGGTC 
GGCGAGGCAA GGCAGCGGGT CTGGGTGCAG GCCTATAGCT TCACCAGTGC GCCGATTGCC 
AGGGCCGTGC TCCATGCCGC CAAAAGAGGC GTCGACGTGA AGGTGGTGTT GGACAGGAGC 
CAGCGCACCC AGAAATATTC GGTGGCGGAT TTTTTTGCCA ATCAGGGGGT GCCCGTGTAC 
ATCGACGACC AGCACGCCAT CGCTCACAAC AAGGTGATGG TGATCGATTC GGGGACGCTG 
ATCACCGGTA GCTTCAATTT CAGCAAGGCA GCGGAGCAGG CCAATGCCGA AAATCTCCTG 
ATATTCCGGG GGAATCCGGC GTTACAGCAA CTCTACGCGG ACAATTTCCG CTTTCATCTC 
AGCCACTCGA CGCCCTATAC GGCGCGGCAC GGTCTGGATT GA
 
Protein sequence
MAGVKRSSIM PVCGLLLAFF AAGAQADGSG WQWLKSWGQN QWSAATAALP HTPVTVPAQG 
TIEVAFSPPG GATAAIVQAV GEARQRVWVQ AYSFTSAPIA RAVLHAAKRG VDVKVVLDRS 
QRTQKYSVAD FFANQGVPVY IDDQHAIAHN KVMVIDSGTL ITGSFNFSKA AEQANAENLL 
IFRGNPALQQ LYADNFRFHL SHSTPYTARH GLD