Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2071 |
Symbol | truA |
ID | 7135060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1820660 |
End bp | 1821475 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643530442 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_002426474 |
Protein GI | 218666580 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.179151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGCAGT TTGCAGAGCC GAGAGGCACC CGTTGGGCAC TGGGCCTTGA ATACGATGGC AACGGATTCT GTGGCTGGCA ACGCCAGTTG GATCAGGACA GTGTACAAGG TGTTGTTGAG GCGGCGTTGA GTCGGGTGGC CCAGTGCCCA ATCTCTGTCG TCGTCGCCGG GCGAACCGAT ACGGGGGTGC ATGCCCTGTG TCAGGTGGTG CATTTCGACA GCCCGGTGCT GCGGCGTCCC GAGGCCTGGG TGCGTGGTGC CAATACCGCA TTACCCGCGG GGGTGGCGCT GCGTTGGGCC CGGGTCGTCC CGGATAGCTT CCACGCCCGT TTCTCCGCTA CGGCCCGGCG TTATCGTTAT GTGATTCTCA ATCGTCGCGA GAAATCCGCC CTATGGCGGA ATCACACCGC CTGGATATAC AGCCCCCTGG ATGTGGAGGC CATGCAGGCA GCGGCGCAAA CCCTGCTGGG CACCCATGAT TTTTCCGCTT TTCGCGCCGC CGCCTGCCAG GCCAAAAGTC CTGTACGGAA TTTGTGCCAG CTTCGGGTCG TCCGGCGGGG CGATCTGATT GCCGTCGATG CCGAGGCCAA CGGTTTCCTG CATCACATGG TGCGTAATCT TGTGGGTGTG CTGATCGCCA TCGGCAAGGC TGACCGGCCC GTGGACTGGG CGGCGGAGGT GCTGGCCAGT CGCGATCGCT GTCGGGCCGG CGTTACGGCC CCGCCGGGTG GGCTTTATTT CGTGGCGCCG CGTTATCCTG CGGAGTTCGG GCTGCCGGTG GATGCAATGG ACGCCGGTTT CCTGACGGGC GATTGA
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Protein sequence | MEQFAEPRGT RWALGLEYDG NGFCGWQRQL DQDSVQGVVE AALSRVAQCP ISVVVAGRTD TGVHALCQVV HFDSPVLRRP EAWVRGANTA LPAGVALRWA RVVPDSFHAR FSATARRYRY VILNRREKSA LWRNHTAWIY SPLDVEAMQA AAQTLLGTHD FSAFRAAACQ AKSPVRNLCQ LRVVRRGDLI AVDAEANGFL HHMVRNLVGV LIAIGKADRP VDWAAEVLAS RDRCRAGVTA PPGGLYFVAP RYPAEFGLPV DAMDAGFLTG D
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