| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2069 |
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| Symbol | trpB |
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| ID | 7134477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 1818778 |
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| End bp | 1819977 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643530440 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_002426472 |
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| Protein GI | 218665131 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.166636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAACTT ATGCTTTGCC GGACGCGTTC GGACACTATG GTCCTTACGG CGGGCGTTTC
GTTGCAGAAA CCCTGATTCC GGCGCTGGAG GAACTGGAGC GTGCCTACCA GGAGGCGCAG
CGGGATCCGG AGTTTCGTGC CGAGCTGCAC AGTGAACTGC GCCAGTTCGT CGGTCGTCCC
AATCCACTCT ATCATGCCGG GCGCCTTTCC AGGGAGTTGG GTGGAGCGCA AATTTACCTC
AAGCGGGAGG ACCTCAACCA CACCGGCGCG CACAAAATCA ATAATGCCGT GGGTCAGGCG
CTGCTCGCCC GGCGTATGGG CAAAAAACGG GTAATCGCCG AGACGGGCGC GGGGCAGCAT
GGTGTCGCCA CGGCGACGGT CGCGACCCGC TATGGCATGG AATGCCTGGT GTATATGGGC
GAGGAAGATA TCCAGCGCCA GTCCAGCAAT GTGTTTCGCA TGCGTTTGCT GGGGGCGCAG
GTGACGGCGG TCAGCAGCGG TACCCGCACC CTGAAGGATG CGCTCAACGA AGCTTTGCGG
GACTGGGTAA CCAATGTCGA AAGCACTTTT TATGTGATCG GAACGGTGGC GGGACCGCAT
CCCTATCCGG TCATGGTGCG GGACTTTCAC CGGGTCATTG GCGATGAAGC GCGGGCGCAG
TGCCTCGAAT TGACGGGACG GCTCCCCGAT TGTCTGATCG CCTGCGTGGG GGGGGGGAGT
AATGCCATTG GCCTGTTTTA TCCCTTTATC GAAGACCGGG CGGTGCGGAT GATCGGCGTC
GAAGCGGGTG GTCTGGGCCT TGGCACCGGA CAACACGCCG CCCCCCTGAC CACCGGACGT
CCAGGGGTAT TGCATGGTAA CCGGACCTAC CTGATGGAAG ACGAAGACGG GCAGATTCTG
CCGACCCACT CCATCTCGGC GGGGCTGGAT TATCCGGGGG TGGGACCAGA GCATGCCTAT
CTGAAGGATA CCGGTCGGGC AGAGTATGTG GCGGCTACCG ATGAAGAAGC GCTGGCCGCC
TTCCATCGCC TGTGCCGCAC CGAGGGCATC ATTCCGGCGC TGGAAAGCGC ACATGCGCTG
GCTCACGCCT TCCGCCTGGC GCCCACCATG CGCTCTGATC AGACCATTAT CGTCAACCTT
TCCGGGCGAG GCGATAAGGA TATCCACACC GTCGCCGCCC TGGAGGGTAT TCATTTATGA
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| Protein sequence | MGTYALPDAF GHYGPYGGRF VAETLIPALE ELERAYQEAQ RDPEFRAELH SELRQFVGRP
NPLYHAGRLS RELGGAQIYL KREDLNHTGA HKINNAVGQA LLARRMGKKR VIAETGAGQH
GVATATVATR YGMECLVYMG EEDIQRQSSN VFRMRLLGAQ VTAVSSGTRT LKDALNEALR
DWVTNVESTF YVIGTVAGPH PYPVMVRDFH RVIGDEARAQ CLELTGRLPD CLIACVGGGS
NAIGLFYPFI EDRAVRMIGV EAGGLGLGTG QHAAPLTTGR PGVLHGNRTY LMEDEDGQIL
PTHSISAGLD YPGVGPEHAY LKDTGRAEYV AATDEEALAA FHRLCRTEGI IPALESAHAL
AHAFRLAPTM RSDQTIIVNL SGRGDKDIHT VAALEGIHL
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