Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2054 |
Symbol | |
ID | 7134234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 1804287 |
End bp | 1805069 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643530425 |
Product | hypothetical protein |
Protein accession | YP_002426458 |
Protein GI | 218667026 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3137] Putative salt-induced outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.933318 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTCAT CGCCGACATC TCAAATACCA TCCCACCAAA ACTACCGCGC GCGCATTATG GTCAGTATAG CTCTCATTTT TATCACCGGG ATCCCATCAT TCACATGCGC ATTCGCCAAC ACAGCCAAGA AATCAAAGCT CTGGTCAGGG AGCGTGGCGT TCGGATTTTC CAGCGCCACG GGAACATACC CATCCATAAA TCTCCATAGC CACGACTGGG TACGCTGGCA ATATCACCGT TGGGAAAATC GTGCGCACGT GAGCTACGAT TACACTGCTG CATCCACTGC GGTTTACGCC AATCGCCTCG TTCTGGAAGA TCAGGGCCGA TATTATTTCA AACCAAAGAT TCACTATATC TTCGGTGACA TCCGTTATGA CAGAAATCAA TTTAACGGAT ATTATTACCA CTTGATAGAA ACCATAGGCG AAGGCAATAT CGTATCACTC GGCAAAACCA TGTCCATAGA TTATCAGGGA GGCATCGGTG CTCAGGAAGA CCAGCCTATA GGTATGAAAT ATCAAACCAA CCCGGCCGCT CGTTTAGCGG TGGGTTATCA GTGGCACCTG ACCCGCCATG CGACTTTCAA GGAAAACGTA ACCGCCCTGC TATCCACAGC CAACAACAAT ACTTATGAGT CGGTTACCAG CCTGCAATCC CAGTTGTATG GTCCATTAGC CTTGCAGCTA TCTTATACCG CCACCTACAA CGAATTCCCC GTGATCAGTT ATTATAAAAA GTTTAACACC ATTACGGCAG CGGATTTGAA ATTCCATTTT TAG
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Protein sequence | MPSSPTSQIP SHQNYRARIM VSIALIFITG IPSFTCAFAN TAKKSKLWSG SVAFGFSSAT GTYPSINLHS HDWVRWQYHR WENRAHVSYD YTAASTAVYA NRLVLEDQGR YYFKPKIHYI FGDIRYDRNQ FNGYYYHLIE TIGEGNIVSL GKTMSIDYQG GIGAQEDQPI GMKYQTNPAA RLAVGYQWHL TRHATFKENV TALLSTANNN TYESVTSLQS QLYGPLALQL SYTATYNEFP VISYYKKFNT ITAADLKFHF
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