Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2053 |
Symbol | xfp |
ID | 7134573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 1801753 |
End bp | 1804200 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643530424 |
Product | putative phosphoketolase |
Protein accession | YP_002426457 |
Protein GI | 218666018 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3957] Phosphoketolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACGG AACACGATGC AGCTTGTGAG GGTGAGAGCA TCAGCGCCTA CGGGACCGCC CGAGCGACGG TCGAAGATCA ACCTCTGAAC ACCGATGATC TGCGTAAGAT CGACGCCTAC TGGCGGGCCA GTCTTTACCT GTGTCTCGGG ATGTTATATC TCCGGGATAA TCCGCTGCTG CGGGATCCGC TCAAGCCGGA GCACATAAAG CCGCGCCTGT TAGGTCACTG GGGATCGGAC GCGGGCCAGT GTTTCACTTA TATTCATTTC AATCGCCTGA TTAACAAATA CGACCTGAAC GCGATCTATA TCTCCGGGCC GGGGCACGGG GCACCGGCCA TACTCTCTCA AGCCTACCTT GAGGGAACGT ACTCGGAGAC ATATCCGGAC AAAAGTCAGG ATATCGCAGG CATGCGGCGA TTTTTCAAGC AGTTTTCCTT CCCTGGGGGC ATCGGCAGTC ACGCGACACC GGAAACCCCG GGCAGCATTC ATGAGGGCGG AGAACTCGGC TACAGTGTTT CGCACGCATT TGGAACCGTC TACGACAACC CCGACCTGAT CGCCCTGGTC ATGGTGGGCG ACGGGGAGGC GGAAACGGGT CCCCTTGCCA CGAGCTGGCA CAGCAATAAA TTCCTCAATC CGATTACCGA TGGCGCGGTA TTGCCGGTGC TCCATCTCAA CGGCTATAAA ATCAACAACC CCACCATTCT GGCCCGCATC ACCCATGAGG AACTGGAGGC ATTATTTATC GGGTATGGTT ATACCCCTTA TTTTGTGGAA GGAAGCGACC CTGCGAGCAT GCACCAGGCG ATGGCTGCCA CCATGGAACG GTGCGTATTG AAAATCCGGG AATTTCAGGA CAAAGCGCGG CACACCGGCA CGGCCTTCCG TCCGCGCTGG CCGATGATCA TCCTCCGCTC CCCCAAGGGC TGGACCGCGC CCCGCAAGGT GGACGGACAC TATCTGGAGG GCTTCTGGCG GGCACATCAG ATCCCCATTC CGGACGTCGT TTCCAATCCG GCACATCTGC AACTGTTGGA ATCCTGGATG CGCAGCTATA GGCCGGAGGA ACTCTTCGAC GCTCAGGGTC GGCTCATCCC CGAGCTGCAC GAACTGGCCC CGAAGGGTAA GCGCCGGATG AGCGCCAATC CTGTGGCCAA CGGCGGTCTG CTGCGCCGCC CTCTGGATAT GCCCGACTTT CGCGTATTTT CCATCGCGGT GCAGGATGCG GGCGGAACCC GGGCGGACAA TGTGCCCACC CTGGGGCACT TTCTCAGGGA GATTACGCGG CGAAACATGC AGAACTTCCG CATCTTCGGT CCGGACGAGA CCCAATCCAA TAAACTTGAC GCCATATATG ATGTCACGCA AAAAGTCTGG CTGGGGGCGT ATTTTCCCGA AGATGCCGAT GGCGGGGCAT TGGCGCTGAG CGGGCGGGTC ATGGAAATGC TCAGCGAACA TACCCTGGAA GGATGGCTGG AGGGGTATCT GCTCAGCGGG CGGCACGGCC TCATCAACAG CTATGAGGCC TTCATTCACA TCATCGATTC CATGTTCAAT CAACACGCCA AGTGGCTGGA AAAGTGCAAC GAATTACCCT GGCGCGCCAA GGTGGCATCA CTCAACCTGC TGATTACGGG TCTGGTCTGG CGCCAGGACC ACAACGGCTT CACCCACCAG GACCCAGGTT TTCTGGACGT CGTCGCCAAC AAGAGCCCCA ATGTCGTGCG CATCTATCTT CCACCCGATG CCAACTGCCT GCTCTCGGTG ACGGATCATT GCCTGCGAAG CGTGAATTAT ATCAATGTGA TTGTCGCGGA TAAGCAAACG CATCTGCAGT ATCTGGACAT GGACGCTGCC ATGGCGCACT GCGCAAAGGG TGCCGGAATA TGGGAATGGG CCAGTAACGA CATGGGAGAA GAACCCGACG TGGTCATGGC CAGTTGCGGT GACGTACCCA CCATGGAATC TCTGGCGGCG ACCGCCCTCT TACGCCAGCA TCTACCCGAT ATAAAAATAC GCTTTGTGAA TGTCGTCGAT CTCTTCAAAC TGGTGCCCCA TACCGAACAC CCCCACGGCA TGACGGACCG TGAATTCGAG GCACTCTTCA CCTCCTCAAA ACCGGTTATT TTCAATTTTC ACTCCTATCC CTGGCTGATA CACCGGCTCA CCTACCGCCG CCCCGCCCAG CACCACATTC ATGTACGGGG CTATAAGGAA AAGGGGAACA TCGACACACC GCTGGAACTC GCCATCCGCA ACCAGACGGA CCGGTTCAGC CTGGCTATTG ATGCCATTGA CCGGATCCCC CGTTTTTGCG ACACGGGTTC CGGTGTGCGT GAGATACTGC TCAACCTGCA ATTCGCCTGT AAAAATCATG CATACGAGTA CGGCGTGGAC CCGCAGGAAA TCACCGACTG GCAATGGCCT TTCCGGGATA CTCCCTGA
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Protein sequence | MTTEHDAACE GESISAYGTA RATVEDQPLN TDDLRKIDAY WRASLYLCLG MLYLRDNPLL RDPLKPEHIK PRLLGHWGSD AGQCFTYIHF NRLINKYDLN AIYISGPGHG APAILSQAYL EGTYSETYPD KSQDIAGMRR FFKQFSFPGG IGSHATPETP GSIHEGGELG YSVSHAFGTV YDNPDLIALV MVGDGEAETG PLATSWHSNK FLNPITDGAV LPVLHLNGYK INNPTILARI THEELEALFI GYGYTPYFVE GSDPASMHQA MAATMERCVL KIREFQDKAR HTGTAFRPRW PMIILRSPKG WTAPRKVDGH YLEGFWRAHQ IPIPDVVSNP AHLQLLESWM RSYRPEELFD AQGRLIPELH ELAPKGKRRM SANPVANGGL LRRPLDMPDF RVFSIAVQDA GGTRADNVPT LGHFLREITR RNMQNFRIFG PDETQSNKLD AIYDVTQKVW LGAYFPEDAD GGALALSGRV MEMLSEHTLE GWLEGYLLSG RHGLINSYEA FIHIIDSMFN QHAKWLEKCN ELPWRAKVAS LNLLITGLVW RQDHNGFTHQ DPGFLDVVAN KSPNVVRIYL PPDANCLLSV TDHCLRSVNY INVIVADKQT HLQYLDMDAA MAHCAKGAGI WEWASNDMGE EPDVVMASCG DVPTMESLAA TALLRQHLPD IKIRFVNVVD LFKLVPHTEH PHGMTDREFE ALFTSSKPVI FNFHSYPWLI HRLTYRRPAQ HHIHVRGYKE KGNIDTPLEL AIRNQTDRFS LAIDAIDRIP RFCDTGSGVR EILLNLQFAC KNHAYEYGVD PQEITDWQWP FRDTP
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