Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2040 |
Symbol | |
ID | 7134669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1789693 |
End bp | 1792056 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643530411 |
Product | TonB-dependent receptor |
Protein accession | YP_002426444 |
Protein GI | 218667490 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAGCA ACATGAAGTT ACGTCCGGTC GTCGTTGCGC TCATGGCATC CGGAGCGCTG CTGTCGAGCG TGCCGGTCAT GGCCGATGGC ATCACCGCCA GTACCCAAAG CGCCGAAAAC AGCTCGGTCG ACGTGGGTCA GGTCAATGCC GCAGCGCAGG GGACTTCTAC CCTGGGGAGC CGTGAGGCGC AATCTCTTAG TCAAAAAACC CGTTTTGATT CCGGCCAGTC TATAAAGGTG CTGGATAAGC ATGAGTTGGC GGCGGCAGGT CCGGTGGGCG GCAGCGCGCA GGCGTTGTCT TACGCGCCGG GCGTCAGTGT TTCCAGTTAC GGATATACCG GTTCCACCAA GACCTCTATC AGCGTGAACG GGATCAAGCA GGGTTGGGGC GGTTTCTCCG GTGGTCAGAT TGACAACGGC AGCCTTTCCG TCACCTTTGA CGGTGTGCCC ATGGTGAATC CGTCCAGTGG CCTCTGGGAG AGTCCTCAGG TGCCGCAGAA CGGCATTCTG CAGGGTATCG GCATCACCTA TGGTCCCGGT AACCCGGTGG ATCGCTGGTA TAACAACATC GGCGGTCAGA TCGATTTTGT TCCCTTGCAG CCCACCAATA AAGCCGGTGC TTCGATTAAA ATGAGCTACG GCAGCTACGA TGCCAAGAAT ATCGTCTTCA ATGTGCGCAC CGGGAGCATA GACGGCTGGT CCACCATCCT CGCGGGTGGC TCCGGTTCCA GCAATAGCTA TCGGCAAACC CCGGATGGTT TTGCCAATCC CAGTTATAAC TACGCCTGGT TCCTGAAAAC CCGCAAGACC TTCAGCAACG GTGACTTCTC ACTGGGTGCC TACCTGGCGA AAGGTTCTGG CTACCGGCCG GTATCCATCC CCCTCAACCC CATTGCCGGT GTGACCATGG ATGGTACACC AAACTCGCCG CTGTATAGCC AGGCGACGTC TGGGTATTAT TCCTCACTGC CGGAAAATGT CTGGTTCAAG CGGGACGGTA ATACCACCTG GCTGGTCTAC AGCAAACTGA ACCTTGCGCT GGACAGCATG GTGGGTCTGC ATAACACGCT CTGGTATCGC AACGGCCACC GCCTGCATTT CCACTACAAC AACTACGGGT TGTCCAATCC GAAGAACCTC TATGAGTACA ATAACCCCCA TACCGATGTA TACGGCGACA AACTGTGGTT TTCAGTGGCC TTGCCCTACA ATGACGTGGA CGTGGGTGGA TTCTTCCTGA ACAGCCGGTA TAACTCGCGG AACGCCTTTT ACAATACCAA CCCGCCGTAC TACGGCTCGG CATCCGTGCC CAACGCGCAC TATCGCAGCG ACTATTTCGA CCAGACCGAC CTTGCCGCGT TCATCCAGGA CCGGATCAGT CCGATGGAAA ACCTGCATAT CACGCCGGGC GTGCGTTTCA TCAATTATCA GACGCGTTAT ACGCCTGCCG CGCAGTCGGA TTTTGCCGCG GCTTATGCCT TGTCTCCGCA AAATAACCAA GGTGCGCTCC CGACCGCCAG CAACAGCTTC ACCAAGGTAG AGCCCTCGGT GGATTTCAAC TGGCAGCCCA TGAAATGGCT GGCGGTATTC GCCAGCTACG CGCAGGCGTA CAAGGAACCG CAGGTAGGCG GCGGAGGTGG CCTGTATCAA GCCACTCCAC CGATTTATAG CCTGGAAAAA AGTGCCGACT ACAATGCTGG CATAAAGATT CATTTCAGGG ATGCCGCTTA CCTGCATAAT TTCTTCCTGC TGGCGAGCTT TTACCATCTG CACTATACCA ACCAATATAT TCCGTTCTAC GATGCCAATG GCAATTATCT GGGTGATGCG AATGGCGATT CCATCTATCA AGGCGTCAAT ATGGCATTGG AAGATGATCC GATTTACAAT CTGCATGTCT TTGCCAATCT CAATTTCGAG AAGGCGACCT TCGCTCATTA CGTGACCGGC GGCGTCAGTT ATGACGGGCT GCCGGTATCC AACGTGCCCA GCAGCACCTT TAATATCGGC ACTGCGTACA GTTACTATCT CTCGGGCGTG TTGCTGGAGC CGCGGATCTG GTATCAGTAC ACCGGCGCAC AAAATATCTT CAATAACAAT ACGACTGCCC CGAGCCAGCA GAAAATGCCG GGCTACGGGA CGGTGAATCT GGGTTTTGAC AGCACCATTC CCACGCGTGG GAGCATTCCT GGTCTGAAAG ATGTCAAGCT GAGCGTCGAT GTCCTCAATC TTGCAAATAA TCGTTATAAC GAGTTCCAGT ATATCACGGC TGGCGGGCTT CTGGGTGGAA GCTCGGCCGG GCAGGTGCTG GCATTGCCTG GCGCTCCGTT GACGGTATAT GGAAGTATTG CGGTAAACTT CTAA
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Protein sequence | MRSNMKLRPV VVALMASGAL LSSVPVMADG ITASTQSAEN SSVDVGQVNA AAQGTSTLGS REAQSLSQKT RFDSGQSIKV LDKHELAAAG PVGGSAQALS YAPGVSVSSY GYTGSTKTSI SVNGIKQGWG GFSGGQIDNG SLSVTFDGVP MVNPSSGLWE SPQVPQNGIL QGIGITYGPG NPVDRWYNNI GGQIDFVPLQ PTNKAGASIK MSYGSYDAKN IVFNVRTGSI DGWSTILAGG SGSSNSYRQT PDGFANPSYN YAWFLKTRKT FSNGDFSLGA YLAKGSGYRP VSIPLNPIAG VTMDGTPNSP LYSQATSGYY SSLPENVWFK RDGNTTWLVY SKLNLALDSM VGLHNTLWYR NGHRLHFHYN NYGLSNPKNL YEYNNPHTDV YGDKLWFSVA LPYNDVDVGG FFLNSRYNSR NAFYNTNPPY YGSASVPNAH YRSDYFDQTD LAAFIQDRIS PMENLHITPG VRFINYQTRY TPAAQSDFAA AYALSPQNNQ GALPTASNSF TKVEPSVDFN WQPMKWLAVF ASYAQAYKEP QVGGGGGLYQ ATPPIYSLEK SADYNAGIKI HFRDAAYLHN FFLLASFYHL HYTNQYIPFY DANGNYLGDA NGDSIYQGVN MALEDDPIYN LHVFANLNFE KATFAHYVTG GVSYDGLPVS NVPSSTFNIG TAYSYYLSGV LLEPRIWYQY TGAQNIFNNN TTAPSQQKMP GYGTVNLGFD STIPTRGSIP GLKDVKLSVD VLNLANNRYN EFQYITAGGL LGGSSAGQVL ALPGAPLTVY GSIAVNF
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