Gene AFE_2007 details

Gene Information

• Locus tag: AFE_2007
• ID: 7136715
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: -
• Start bp: 1758220
• End bp: 1758906
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643530378
• Product: hypothetical protein
• Protein accession: YP_002426412
• Protein GI: 218667812
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1305] Transglutaminase-like enzymes, putative cysteine proteases

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTGTTGCG CGAACCCACG CAGAAATAAC AGGAAATTTA TGAAGCTCGC AAAATTCGAT 
ACCCCGCCGT CGCCGCACTT CCTGATGGAA AGCGCCACCG TAGATTATGC GCATGCCGAT 
ATCCGCAAGT TGGCGGCCGC CTTATCCTCT GACGATCCAA CGGCAACCGC CAGGCATTGC 
TTCGAATGGG TACGCGATCA CATCGAGCAC AGCATGGATT TTCACCGAGA AGAAGTGACC 
TGCGTAGCCT CGGATGTGTT GCAGCAAGGC ACTGGCCTAT GCACCGCGAA AAGTCATCTG 
CTCGTGGCCT TATGGCGCGC CAACCAAATC CCTGCGGGAT TCTGTTATCA ACGGCTGACG 
CTGGATGGCC CCAATCCGCC CTACTGTACA CACGGCTTCA CCGCGGTCTG GCTGGATGAC 
CGGGGCTGGT ATCGCTGTGA TGCGCGCGGC AACAGCAAAC CCGGGATCCA CTGCGAATTC 
ACGCCCGGCC AAGAAAATCT TGCTTTCTCG TCGAGGTATG ACGGCGAGCG GACCTATCCG 
GAGGTTTGGG CAGAGCCCTG GCCAGATTTG CTCACCGCCA TGGAAAAACT GCAAAACATA 
TCGCAGTATC GGAGCCATCC CATTGATGCC CGCCCACCCG CCGCAGATTT GTGCGTAAGT 
GAGTCTGCAG CGCCGAACAT GGAATGA 

 

Protein sequence

MCCANPRRNN RKFMKLAKFD TPPSPHFLME SATVDYAHAD IRKLAAALSS DDPTATARHC 
FEWVRDHIEH SMDFHREEVT CVASDVLQQG TGLCTAKSHL LVALWRANQI PAGFCYQRLT 
LDGPNPPYCT HGFTAVWLDD RGWYRCDARG NSKPGIHCEF TPGQENLAFS SRYDGERTYP 
EVWAEPWPDL LTAMEKLQNI SQYRSHPIDA RPPAADLCVS ESAAPNME