| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1987 |
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| Symbol | lpxH |
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| ID | 7134639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1741755 |
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| End bp | 1742528 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643530360 |
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| Product | UDP-2,3-diacylglucosamine hydrolase |
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| Protein accession | YP_002426394 |
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| Protein GI | 218667284 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTGGTGC AAGGTGCAGA CCTTGGTGAT GGCCCCGTGC TGTTTATCTC CGACCTGCAC
CTCTGCTCCG CACAGCCCGC GCTGACCGCC CTGTTCCGCC ATTTTTGTTG GCACGAAGGC
CGGGCTGCAC GGGCGGTTTT CATTCTGGGC GATCTGTTTG ACTACTGGGT GCATCGGGAT
CAGGCGGCGG AAACACCTTA TACGGAAATC CTTGCCCTGC TCCATGGGTT GCATAAGCAG
GGGACCACGG TGTATCTCAT GGTCGGTAAC CGGGACTTTG CCCTGGAAGC CGACTTTCTG
GCGCAGTTCG GGATTATCGC TCTGCCCGAC CCGGCGCTGC TGCAACTGGG CGATCAGCGT
ATCCTCCTGA CCCATGGTGA TTTGCTGTGC AGCGATGATC ATCGTTACCA GCGCTTTCGC
CGGGTGATTC GTCATCCGCT GACTCGACTG ACGCTGGGAC GCCTGCCTTA TGCCTGGCTC
CAGCGTATCG CCCGCGGATT GCGTCGCGGC AGTAGCCGGG AAGTGCGGAC CAAGGCACCA
GCCATAACGG ATGCCAATCC GCAGACCATC GTTGCCGCCC TCCACGGGGA GGGTGCTTTC
ACGCTGGATG GTGCCACTTA TGATATTTTG ATTCACGGCC ATACCCATCG CCCCGTTTGG
GAGCAGGGTC CGGAGGGACG GCGCATGGTG CTGGGTGCCT GGGGTGCTGA TGGCGCACAA
ATCGGGCGTT GGGAAAATGG CCAATGGTCC TTGCAGCTAC TGAGTCCACC GTAA
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| Protein sequence | MVVQGADLGD GPVLFISDLH LCSAQPALTA LFRHFCWHEG RAARAVFILG DLFDYWVHRD
QAAETPYTEI LALLHGLHKQ GTTVYLMVGN RDFALEADFL AQFGIIALPD PALLQLGDQR
ILLTHGDLLC SDDHRYQRFR RVIRHPLTRL TLGRLPYAWL QRIARGLRRG SSREVRTKAP
AITDANPQTI VAALHGEGAF TLDGATYDIL IHGHTHRPVW EQGPEGRRMV LGAWGADGAQ
IGRWENGQWS LQLLSPP
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