Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1977 |
Symbol | |
ID | 7134496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 1734020 |
End bp | 1735231 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643530350 |
Product | fosmidomycin resistance protein, putative |
Protein accession | YP_002426384 |
Protein GI | 218665709 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.85297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCTGC AAAAGATCGG GAATCTCCCC AGCGCGGCCA CCGACGTCAC CCGCTTTGAG GTTTTGGGCG CTATCAGCGT GTCACATTTT CTCAATGATA GCATCCAGTC GCTGATGCTG GCGGTGTACC CGCTATTCAA AAGCCATTTC GACCTGAGTT TTGGGCAGAT CGGGTTGATT ACGCTCGCCT ATCAGGTGAC CGCATCCATC GTTCAACCGT TGGTCGGGCG TTTTACCGAT GGCCACCCCA TGCCCTATTC ATTGCCCTTC GGCATGCTGT TTACGTTTGG TGGGCTGCTG TTGCTATCCG TGGCTCCAAA TTATGAGGTG CTCTTGTTGG CAGCAGCGTT AGTGGGCCTG GGTTCTTCAG TATTCCACCC AGAGTCGTCG CGGGTGGCGC GGATGGCCTC TGGCGGGCGC CACGGACTGG CGCAATCCAT CTTTCAGGTG GGTGGAAATG TGGGTACCGC AGCGGGCCCG TTGCTGGCCG CCTTTGTCGT CATGCCCAAC GGTCAGCACA GCCTGTCATG GTTCTCGCTC GCGGCGTTGC TAGCCATTGT GATTCTTTCT TTCGTGGGGC GCTGGTATCA GCACCAGCAC CGTCAGCCCA GAAGGCCAGT GGCAAAGGCC GTGGCGCCCT TGCTACCTGC CAAACTGGTG CGACGCAGCA TGATCATACT GGTCGCACTG ATGTTCTCCA AGTTTCTGTA TCTGACCAGC ATCAGCAGTT ACCTGATTTT TTACCTGATG CAGCGCTTTC ATATCGGAAC CCGGGAAGCG CAGATGCATC TCTTCGTATT TCTGGCGGCA GTGGCAGCGG GGACATTGGC GGGCGGGCCG ATTGGTGACC GGATCGGTCG CAAGAAAGTG ATCTGGGTCT CCCTGCTGGG GATCGCGCCC TTCACCATGG CTCTACCTTA CGTGGGCCTG ACCCTGAGTG CCATGTTGAC CATGGTCATC GGTTTTCTGC TGGCTTCGGC CTTTCCGGCC ATTGTGGTGT ATGCGCAGGA ATTGGTACCC GGCAAGATCG GGACCGTTTC CGGTCTGTTT TTCGGGCTGG CTTTTGGTCT GGGCGGGGTC GGTGCCGCAT TGCTGGGGGA ACTGGCAGAC GTCTGGAGTA TCCAGGTGGT ATATCAGATA TGCGCTTTCC TGCCTTTGCT CGGTATACTG GCCGGATTTC TGCCCCATAT CCCCAGTGTG CGAAAGCGTT AG
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Protein sequence | MSLQKIGNLP SAATDVTRFE VLGAISVSHF LNDSIQSLML AVYPLFKSHF DLSFGQIGLI TLAYQVTASI VQPLVGRFTD GHPMPYSLPF GMLFTFGGLL LLSVAPNYEV LLLAAALVGL GSSVFHPESS RVARMASGGR HGLAQSIFQV GGNVGTAAGP LLAAFVVMPN GQHSLSWFSL AALLAIVILS FVGRWYQHQH RQPRRPVAKA VAPLLPAKLV RRSMIILVAL MFSKFLYLTS ISSYLIFYLM QRFHIGTREA QMHLFVFLAA VAAGTLAGGP IGDRIGRKKV IWVSLLGIAP FTMALPYVGL TLSAMLTMVI GFLLASAFPA IVVYAQELVP GKIGTVSGLF FGLAFGLGGV GAALLGELAD VWSIQVVYQI CAFLPLLGIL AGFLPHIPSV RKR
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