Gene AFE_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1976 
SymbolxseB 
ID7136177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1733640 
End bp1733909 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content60% 
IMG OID643530349 
Productexodeoxyribonuclease VII, small subunit 
Protein accessionYP_002426383 
Protein GI218666625 
COG category[L] Replication, recombination and repair 
COG ID[COG1722] Exonuclease VII small subunit 
TIGRFAM ID[TIGR01280] exodeoxyribonuclease VII, small subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.700847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGAACA TGGAAAAGCA TATGAACGAC GAATCGTCCC CCGTGGAAGC CCCCGCCGAC 
TTCGCAAGCA CCCTGGATGC CTTGGAAGAG ACCGTTCGCC GCCTGGAAGG GGGGCAGTTG
GGTCTGGAAG ACTCTGTCGC CCTTTTTCAG CGCGGCATCG AGTTGTCCAG GCGTGCCGAG
GCGCAGTTGC AGAACGCGCG GCAAATCGTG GAAACATTGC TCGGAGAGGA CGCGGTTCCT
GCTCCGCTTA CTCAGGAAGA AGACGGATGA
 
Protein sequence
MANMEKHMND ESSPVEAPAD FASTLDALEE TVRRLEGGQL GLEDSVALFQ RGIELSRRAE 
AQLQNARQIV ETLLGEDAVP APLTQEEDG