Gene AFE_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1966 
Symbol 
ID7137064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1718746 
End bp1719747 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content57% 
IMG OID643530339 
ProductNAD-dependent epimerase/dehydratase family protein 
Protein accessionYP_002426373 
Protein GI218665304 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0803132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGCA GAATACTTAT TACCGGTGCT GCGGGTTTTA TCGGGTTTCA TCTGGCGCGT 
CGTCTGTTGG CCGATGGCTG GGTTGTCAGC GGGATAGACA ACCTCAATGA CTACTACGAT
CCCGGCCTGA AACGCGGCCG TCTGGCGCAA CTGGAGGGGC ACCCAGCCTT CCAGTTCCAA
CCTCTGGATC TGGCAGATCG CGAGGGTATG CAGACGCTTT TTGCAGGCCC CCACTTTGAT
GCCGTCGTCA ACCTCGCGGC TCAGGCAGGG GTGCGGCACT CCCTGAAAGC ACCGCACAGC
TACGTGGACA GTAATGTCGT TGGTTTTCTG AATGTGCTGG AGGGCTGCCG GGCGCAGGGG
GTCGATCATC TGCTTTTCGC TTCTTCCAGT TCGGTATATG GTGCCAACAA TCGTTTGCCT
TACAGTGTCC ATGACCCGGT AGATCATCCA GTCAGCCTTT ATGCGGCCAC CAAGCGGGCA
GGTGAGCTCA TGGCGCACAG CTACGCTCAT CTTTATGGTA TTCCCAGTAC TGGATTGCGG
TTTTTTACAG TCTATGGCCC TTGGGGGCGT CCCGATATGG CCTATTTCAG CTTTACGCAG
AAAATCCTGG CCGGGCATCC CATCCCCGTA TTCAACCACG GCCAGATGCA GCGCGATTAC
ACTTATATCG ATGACATCAT CGAAGGGGTG GCGCGACTCA TTCCACGTGC GCCAGAAGCG
CAGGATATCT GGCCGGAAGA CCCTGCAAGC AGTGCCGCCC CCTTCTGCAT TCAGAATATC
GGTAACCACA CACCCGTTGC ACTCACGGAT TTTATCCGCA TTCTGGAGGA GTGCCTCGGC
AAGTCCGCGC AAATTGAATG GCTTCCCATG CAGGATGGCG ACGTGGTGGC TACCTATGCC
GACGTTACCG CGTTACAGCA GAGCGTGGGC TTTGCCCCAA ACACCCCTTT ACGGACGGGT
CTCCAGCGCT TTGTGACCTG GTATCGCCAG TACTACGGCT GA
 
Protein sequence
MEGRILITGA AGFIGFHLAR RLLADGWVVS GIDNLNDYYD PGLKRGRLAQ LEGHPAFQFQ 
PLDLADREGM QTLFAGPHFD AVVNLAAQAG VRHSLKAPHS YVDSNVVGFL NVLEGCRAQG
VDHLLFASSS SVYGANNRLP YSVHDPVDHP VSLYAATKRA GELMAHSYAH LYGIPSTGLR
FFTVYGPWGR PDMAYFSFTQ KILAGHPIPV FNHGQMQRDY TYIDDIIEGV ARLIPRAPEA
QDIWPEDPAS SAAPFCIQNI GNHTPVALTD FIRILEECLG KSAQIEWLPM QDGDVVATYA
DVTALQQSVG FAPNTPLRTG LQRFVTWYRQ YYG