Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1966 |
Symbol | |
ID | 7137064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1718746 |
End bp | 1719747 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643530339 |
Product | NAD-dependent epimerase/dehydratase family protein |
Protein accession | YP_002426373 |
Protein GI | 218665304 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0803132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGGCA GAATACTTAT TACCGGTGCT GCGGGTTTTA TCGGGTTTCA TCTGGCGCGT CGTCTGTTGG CCGATGGCTG GGTTGTCAGC GGGATAGACA ACCTCAATGA CTACTACGAT CCCGGCCTGA AACGCGGCCG TCTGGCGCAA CTGGAGGGGC ACCCAGCCTT CCAGTTCCAA CCTCTGGATC TGGCAGATCG CGAGGGTATG CAGACGCTTT TTGCAGGCCC CCACTTTGAT GCCGTCGTCA ACCTCGCGGC TCAGGCAGGG GTGCGGCACT CCCTGAAAGC ACCGCACAGC TACGTGGACA GTAATGTCGT TGGTTTTCTG AATGTGCTGG AGGGCTGCCG GGCGCAGGGG GTCGATCATC TGCTTTTCGC TTCTTCCAGT TCGGTATATG GTGCCAACAA TCGTTTGCCT TACAGTGTCC ATGACCCGGT AGATCATCCA GTCAGCCTTT ATGCGGCCAC CAAGCGGGCA GGTGAGCTCA TGGCGCACAG CTACGCTCAT CTTTATGGTA TTCCCAGTAC TGGATTGCGG TTTTTTACAG TCTATGGCCC TTGGGGGCGT CCCGATATGG CCTATTTCAG CTTTACGCAG AAAATCCTGG CCGGGCATCC CATCCCCGTA TTCAACCACG GCCAGATGCA GCGCGATTAC ACTTATATCG ATGACATCAT CGAAGGGGTG GCGCGACTCA TTCCACGTGC GCCAGAAGCG CAGGATATCT GGCCGGAAGA CCCTGCAAGC AGTGCCGCCC CCTTCTGCAT TCAGAATATC GGTAACCACA CACCCGTTGC ACTCACGGAT TTTATCCGCA TTCTGGAGGA GTGCCTCGGC AAGTCCGCGC AAATTGAATG GCTTCCCATG CAGGATGGCG ACGTGGTGGC TACCTATGCC GACGTTACCG CGTTACAGCA GAGCGTGGGC TTTGCCCCAA ACACCCCTTT ACGGACGGGT CTCCAGCGCT TTGTGACCTG GTATCGCCAG TACTACGGCT GA
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Protein sequence | MEGRILITGA AGFIGFHLAR RLLADGWVVS GIDNLNDYYD PGLKRGRLAQ LEGHPAFQFQ PLDLADREGM QTLFAGPHFD AVVNLAAQAG VRHSLKAPHS YVDSNVVGFL NVLEGCRAQG VDHLLFASSS SVYGANNRLP YSVHDPVDHP VSLYAATKRA GELMAHSYAH LYGIPSTGLR FFTVYGPWGR PDMAYFSFTQ KILAGHPIPV FNHGQMQRDY TYIDDIIEGV ARLIPRAPEA QDIWPEDPAS SAAPFCIQNI GNHTPVALTD FIRILEECLG KSAQIEWLPM QDGDVVATYA DVTALQQSVG FAPNTPLRTG LQRFVTWYRQ YYG
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