| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1956 |
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| Symbol | |
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| ID | 7135032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 1706127 |
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| End bp | 1707218 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643530329 |
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| Product | oxidoreductase, FAD-binding |
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| Protein accession | YP_002426363 |
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| Protein GI | 218667371 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.034563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACTG AAATCTCTGC GCATACGGAT GTTCTGCTCA TTGGCGCTGG CGCAATTGGC
TTACTCAGTG CGATCAAGCT TGCGGAGGCC GGTCTGCGGG TTACGGTGCT CGATCAAGGT
CATATTGGTC AGGAGGCATC ATGGGCTGGT GGGGGCATCC TGAGCCCGCT GTATCCGTGG
CGCTACCCAC CTGCCCTATT GAGTCTCGCG CTGTATAGTA TGCAGCGCTA TTGCTCCCTG
ACTTCCAGAT TGGCAAAGCA AACTGGCATC GATCCTGAAT GGATACCCTC CGGTTTGCTT
ATTCTGGAGG GCGAACACGA GAAAATCCCA AATGATGTGT TGGCTTGGGG GGCGAGGTGG
GGGCTGGATT GGCGCCTGGG GCCTGCAGAA AAAACGCAAA CACTCTGGTG TCCGGAGGTC
GCCCAGGTAC GGAACCCCCG CCTGCTGGCG GCGATGTCCG CACGTTGCCG TCAACTGGGC
GTCGTATTGC ATGAAAATAC CGCGGTCACC CGTTTCCGTA GACGGGGGGA ACGACTGGAG
GGCGTAGAAA CCACCGCCGG ATTTATGCCG ATAGAACGGA TCGTCGTGAC GGCCGGTGCC
TGGAGCGAAA AAATCCTTGC GGAAACGGGT AGTCATCTGG ATATCATTCC GGTGCGCGGG
CAAATCCTCC TGTTTCAGGG AAAACCCGGA GTCCTCGATA CGATATTGAT GCACGATAAT
CATTATTTGG TGCCGCGGCG GGACGGACTG GTTCTGGCTG GCAGCACGAG CGAATATGTC
GGTTTTGATA AGTCGACTAC AAACAAGGCA CGAGAAGAAC TTTTGAGCTT TACTATCAAG
ATGCTTCCTG ATCTGGCGCA GGCTCCGGTC CTCAGGCAGT GGTCCGGATT GCGGCCGGGA
AGCCAGGATA GCATCCCGTA CATCGGCCCC ATTCCCGAAT GGGAGGGGCT CTTTGTCGCT
GCTGGCCATT TTCGCTATGG ACTCACCAAC GCGCCCGCGA CCGCCGATAT CCTGGTCTCC
CTGTTGACGG GGATACCGCT GCCGTTGGAT ATTGCCCCCT ATGCAGTCCT GACACCGAGG
TCAGCACATT AA
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| Protein sequence | MPTEISAHTD VLLIGAGAIG LLSAIKLAEA GLRVTVLDQG HIGQEASWAG GGILSPLYPW
RYPPALLSLA LYSMQRYCSL TSRLAKQTGI DPEWIPSGLL ILEGEHEKIP NDVLAWGARW
GLDWRLGPAE KTQTLWCPEV AQVRNPRLLA AMSARCRQLG VVLHENTAVT RFRRRGERLE
GVETTAGFMP IERIVVTAGA WSEKILAETG SHLDIIPVRG QILLFQGKPG VLDTILMHDN
HYLVPRRDGL VLAGSTSEYV GFDKSTTNKA REELLSFTIK MLPDLAQAPV LRQWSGLRPG
SQDSIPYIGP IPEWEGLFVA AGHFRYGLTN APATADILVS LLTGIPLPLD IAPYAVLTPR
SAH
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