| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1936 |
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| Symbol | |
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| ID | 7136188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1687416 |
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| End bp | 1688603 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643530309 |
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| Product | PQQ enzyme repeat domain protein |
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| Protein accession | YP_002426345 |
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| Protein GI | 218665070 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCGC GACATTTCTC CCGCGCTCTC GGGCGCATGG TAGCGCTGGG TGCGGTGGCC
ACTCTGCTGA ATGGTTGTGG TATCCTGTCC TGGTTTCATT CCACTCCTTC CCCCAAGACT
CCGCCGCCCC TCGCCAAAGG GATGGATAAA GTATCCTTCT CCACCGAATG GCAGGCCCGT
CTCTATGGTA TCTGGCAGGT CAATCCCTAT CAGGGCACGT TGATTGCCCA TGGCAAAGGG
CAGATTGTGG TCGCTGACGC ATCCGGGCGT CTGGTCAGCT TGACTGACGG TGGTCACCAG
ATGTGGACGC GCAGCCTGGA TGGCCGGACG GCGCGCGGTC CGACACTGGC AAACGGCGTG
GTTTATACCG GTACAGACAC TGGAAAAGTC TATGCGTTTA CTGCAAAGGA CGGCCATCCG
CTCTGGGCCA TACAGTTGAG TTCTGAAGTG CTTACTCCGG TAGTGGCGGC GGGTGACCAT
CTTCTGGTGC AGACGGTGGA TGGGCATCTC TGGGCTCTCG ACCCGAATAA TGGCAAGGTG
CAATGGACAT TCTCCATGAA TCAGCCGACC CTCATCCTGC GTGCGGTGGC TACGCCAACG
GTGCATGACG GAGTGGTGTA TGCCGGTTTT GCGGACGGAA CGGTGGTGGC TCTTAGCCTG
GGGTCCGGTG CAGAGCTCTG GCGGGCGCAG GTCGCCTTAC CCCACGGCAG CAATGCATTG
GCGCGTATGG TGGATGTGGC CGCAAGCCCG GTGGTTGCGG GAGGGCAGGT CATTACTGCA
GCCTATCAGG GGAATCTGGC TGCTTACGCG TTGCAGGGCG GCACCCAGAA CTGGAGTATA
CCGATGTCCG TCTATCAGAC GCCGGTGCTG GAGGACGGCC ATCTGCTCGT CGCGGATGCC
GATGGGCGGA TATCCTCCGT AGACCCAGCT TCCGGCAACG TGCTCTGGCG CAATGATCGT
CTTAGCGGGC ATTATTTGAC CGGGTTTGGC CTCTGTGGCG GGAGCCTGCT GACCACGGAC
AATGCGGGTT ATCTCTATGT CATCGATCCA CAGACTGGGC ACCGCATAGG TCAGACGCGG
CTGTCCGATA GCGGTATTCA AAGTACGCCC GTTTGTCTGG GAAGTGGCCA GATCCTAGCC
CTCAGTGATG CGGGCACCTT GTATCGAATC CACCTGGCAA AGCGCTAA
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| Protein sequence | MNPRHFSRAL GRMVALGAVA TLLNGCGILS WFHSTPSPKT PPPLAKGMDK VSFSTEWQAR
LYGIWQVNPY QGTLIAHGKG QIVVADASGR LVSLTDGGHQ MWTRSLDGRT ARGPTLANGV
VYTGTDTGKV YAFTAKDGHP LWAIQLSSEV LTPVVAAGDH LLVQTVDGHL WALDPNNGKV
QWTFSMNQPT LILRAVATPT VHDGVVYAGF ADGTVVALSL GSGAELWRAQ VALPHGSNAL
ARMVDVAASP VVAGGQVITA AYQGNLAAYA LQGGTQNWSI PMSVYQTPVL EDGHLLVADA
DGRISSVDPA SGNVLWRNDR LSGHYLTGFG LCGGSLLTTD NAGYLYVIDP QTGHRIGQTR
LSDSGIQSTP VCLGSGQILA LSDAGTLYRI HLAKR
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