Gene AFE_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1930 
Symbol 
ID7136720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1681444 
End bp1682532 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content59% 
IMG OID643530303 
Productradical SAM enzyme, Cfr family 
Protein accessionYP_002426339 
Protein GI218666070 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGATT TTTTGGTGGT TGCTCCGGCC GAAAGGCCAC ACCTGCTGGG ACTGGGTCGC 
CAGTCCCTCG CTAAGTTATT GCGTACCTGG GGAGAGTCCC CCTTTCGTGC CAACCAGATT
TTGCAATGGC TGCATACCCG TCAGGTAACG GATTTCGCGG CCATGACCGA CATCAGTAAA
ACCCTTCGCG CTCGCCTCGC CGCAGAAACC CGCATCGACA TGCCGGAAAT TATCGCCGAT
CAGACAGCGG CGGACTGCAC TCGCAAATGG CTGCTCCGGT TGCCCGATGG CAATGCCATA
GAAACGGTTT TCATTCCTGG AGAAGATCGT GGTACGCTGT GCATCTCTTC GCAGGTAGGC
TGTTCTCTGG CCTGCAGTTT TTGTGCTACT GGTGCGCAGG GGCTCAGCCG CAACCTCGAA
ACCCATGAAA TTATCGCACA GGTGCGGGTG GCACGCGATT TTTTAGGCCT GGATGCGATC
ACCAATATCG TTTTCATGGG CATGGGCGAA CCGATGCTCA ATTTGCGCGA GGTATTGCCG
GCGCTGGATT TGTTGCGCGA CGATTATGCC TACGGCTTTG GCGCGCGGCG CATTACCGTC
AGCACCGCAG GTGTGGTGCC TGGTATGGAT CGACTGGGTG CCGAAAGCCC GGTCAATCTC
GCGATCAGCT TGCACGCCAG CCGTGATGAA ATCCGCGACA TTCTCGTGCC GGTAAACCGC
CACTACCCGC TGGCGGAGCT GCTCGCCGCC TGCCGCCGCT ATCCTTTGCC GCCCCGGCGC
CGCATCACCT TCGAATATGT GATGCTGGAA GGAGTCAATG ACGCCGACTC CCATGCGCGG
GAACTCCTCC GCCTGTTACG AGACATCCCG GCCATGGTGA ATTTGATTCC CTTCAATCCC
TTTCCCGGCT CAGATTATAA ACGGTCGCCA CAGGTGCGCA TCGATGCTTT TCGCGATATC
ATCCTGCGCG GTAACGTAAT GACGGTTACG CGCCGGCCAC GTGGTGACGA CATCGCCGCC
GCCTGTGGTC AGTTGGCCGG ACAGGTACGC GCGGGTCGTC GCAGTATTCC CTTGGCAGTG
CATTCATGA
 
Protein sequence
MGDFLVVAPA ERPHLLGLGR QSLAKLLRTW GESPFRANQI LQWLHTRQVT DFAAMTDISK 
TLRARLAAET RIDMPEIIAD QTAADCTRKW LLRLPDGNAI ETVFIPGEDR GTLCISSQVG
CSLACSFCAT GAQGLSRNLE THEIIAQVRV ARDFLGLDAI TNIVFMGMGE PMLNLREVLP
ALDLLRDDYA YGFGARRITV STAGVVPGMD RLGAESPVNL AISLHASRDE IRDILVPVNR
HYPLAELLAA CRRYPLPPRR RITFEYVMLE GVNDADSHAR ELLRLLRDIP AMVNLIPFNP
FPGSDYKRSP QVRIDAFRDI ILRGNVMTVT RRPRGDDIAA ACGQLAGQVR AGRRSIPLAV
HS