| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1929 |
|---|
| Symbol | ndk |
|---|
| ID | 7135633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 1681015 |
|---|
| End bp | 1681440 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643530302 |
|---|
| Product | nucleoside diphosphate kinase |
|---|
| Protein accession | YP_002426338 |
|---|
| Protein GI | 218667431 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0105] Nucleoside diphosphate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTTG AGCGCACCCT TTCCATCATC AAACCCGATG CCGTTCAGAA AAATGCCATC
GGTGCCATTC TTGGTCGCTT CGAGAAGGCG GGGCTGCGCA TCGCAGCCGC CAAGATGTTG
CACCTCAGTC GCGATGACGC GGGTGGGTTT TATGCGGTAC ACCAGGCCCG GCCTTTTTAC
GGCGAGTTGT GCGACTTCAT GAGCAGCGGT CCGGTATTGG TCACGGTGCT GGAGGGTGAG
GGTGCCATCG CCAAAAACCG TGATCTGATG GGCGCTACCA ACCCCAAGGA TGCCGCTGCA
GGAACGATTC GTGCGGACTT TGCCGACAGT ATTGATGCCA ACGCCGTGCA TGGTTCAGAC
AGTGCCGAGA CTGCGGCATG GGAAATCAGT TACTTTTTTG GTCAGCGGGA GATTTTTGCG
CACTGA
|
|---|
| Protein sequence | MAVERTLSII KPDAVQKNAI GAILGRFEKA GLRIAAAKML HLSRDDAGGF YAVHQARPFY
GELCDFMSSG PVLVTVLEGE GAIAKNRDLM GATNPKDAAA GTIRADFADS IDANAVHGSD
SAETAAWEIS YFFGQREIFA H
|
|---|
| |