Gene AFE_1921 details

Gene Information

• Locus tag: AFE_1921
• Symbol: recR
• ID: 7134374
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 1673115
• End bp: 1673714
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643530294
• Product: recombination protein RecR
• Protein accession: YP_002426330
• Protein GI: 218667448
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGACG TTCCGAGTAT GGACGCCCTG GTGGCACTGC TACGCCGCCT ACCGGGTATT 
GGCCCGCGTT CGGCGCAACG GATCAGCTAT GAGTTGCTGG TGCGTAAGCG CGATCTCATG 
CCGCAACTCG CCGCAGCCTT TCAGCAAGCC CACGCGGTGG TCCGTTTTTG TGAGCGCTGC 
AACAACCTGA GCGAAGCGCC ATTGTGTGCC GTCTGTCGTT CCGAACACCG GGACCGTTCC 
ATTTTGTGCG TGGTGGAATC GCCCGCTGAT CTGCGTGCAA TCGAGGATAC GGGGGTGTTC 
GTCGGCGAAT TTTTCGTATT GATGGGGCAT TTGTCGCCCC TGGACGGCAT CGGTCCCGAA 
GCCCTGCATA TCGACCGCCT CAGCGCGCGA CTGGGTGAAA CAGACTTGCA GGAAGTGATT 
TTTGCGACCA ATCCTACCCT GGAAGGAGAG GCTACAGCCC AGTTTCTCGC TGGACTGGTT 
CCTGACGGTG TCACCATCAG TCGTATCGCG CGGGGGGTGC CGGTGGGTGG TGAACTGGAA 
TATGTCGATC GCAGCACCCT CGGGCGCGCC TTGCATGGTC GTCGCTTGCT CGACGAATAA 

 

Protein sequence

MADVPSMDAL VALLRRLPGI GPRSAQRISY ELLVRKRDLM PQLAAAFQQA HAVVRFCERC 
NNLSEAPLCA VCRSEHRDRS ILCVVESPAD LRAIEDTGVF VGEFFVLMGH LSPLDGIGPE 
ALHIDRLSAR LGETDLQEVI FATNPTLEGE ATAQFLAGLV PDGVTISRIA RGVPVGGELE 
YVDRSTLGRA LHGRRLLDE