Gene AFE_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1920 
Symbol 
ID7136513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1672785 
End bp1673108 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content59% 
IMG OID643530293 
Producthypothetical protein 
Protein accessionYP_002426329 
Protein GI218666428 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGTG GACTGGGGAA TATCATGAAG CAGGCGCAGC AACTCCAGGA GCGTTTGCAA 
AAGACGCAGG AAGAACTTGC CCAGGTAGAG GTGCAGGGCC ACGCGGGTGG CAATCTGGTG
GAAGTCACCA TGACCTGCCG ACATGACGTG CGGCGAGTTC GCATCGACCC CTCTCTGCTG
ACCGACGGCG ATCAGGAGAT GCTCGAAGAT CTTGTGGCAG CGGCCATCAA TGACGCCGTG
CGCACTGCTG AGAAGGTCAG CGCGGAGCGG ATGTCGGAAG TGACTGGCGG CATGAATATT
CCGGGCATGA ACCTGCCTTT CTAG
 
Protein sequence
MKGGLGNIMK QAQQLQERLQ KTQEELAQVE VQGHAGGNLV EVTMTCRHDV RRVRIDPSLL 
TDGDQEMLED LVAAAINDAV RTAEKVSAER MSEVTGGMNI PGMNLPF