Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1910 |
Symbol | fabF |
ID | 7137274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 1665604 |
End bp | 1666845 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643530286 |
Product | 3-oxoacyl-(acyl-carrier-protein) synthase II |
Protein accession | YP_002426323 |
Protein GI | 218667697 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.374977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGAGAC GTGTAGTGAT TACGGGTTTG GGGATTGTGT CACCCGTCGG TGTGGGTATC CCGGCGGCGT GGAATTCGAT AACCCAGGGA CGCAGCGGTA TCGGTCGGGT GACCCGACTG GATCCTGCCT CCTACAGTTC CCAGATTGCA GGAGAAGTCC GTGGCTTCGA TATTGGTCAG TACATTCCGA TCAAGGAAGC CCGCAAGATG GATTTATTTA TCCATTACGG CCTCGTGGCG GCTATGGAAG CGGTTGCAGA CTCTGGTTTA CAGATCGGAG CAGATATTGC AGATCGGGTG GGCGTATCCA TCGGCAGTGG TATCGGTGGT CTGCCGGGCA TCGAATCCGA GCATCAGGTC GTCACGGAAA GCGGCCCCCG CCGGATCTCG CCTTTCTTTA TTCCACGTTG CATCGTCAAT ATGGTGTCGG GGCACGTTTC CATTATGTAT GGGGCCAAAG GGCCCAACAT CGCCATGGCG ACGGCATGTT CCACCGGCAC ACATTCCATC GGCGAGGCGG CGCGGCTCAT CGAGTATGGC GACGCCGACG TCATGATCGC CGGTGGTGCC GAGGCGGCCG TCAGCCCTTT GGGGTTGGGT GGGTTTTGTG CGGCGCGGGC GCTCTCTACG CGCAACGCCG ATCCTGAGAA GGCGAGCCGC CCCTGGGATA AGGATCGGGA TGGTTTCGTG CTGGGCGAGG GTGCGGGTGT TCTCATTCTC GAAGAGTATG AATTTGCCCG GCGTCGTGGG GCACGGATCT ACGCAGAGTT GGCCGGCTAC GGCATGAGCT CCGATGCTTA CCATATGACC CAGCCCGCCC CGGGTGGGGA AGGGGCCGTC CGTTGCATGC AGGCCGCGCT GCGTAACGCC TCGGTGTCGC CCGAAATGGT GGGTTATATC AACGCGCACG GGACATCTAC CCCGCTGGGA GATCGGTCGG AGACCGATGC GGTACATACC GTATTCGGCG AACATGCACA GCGATTGGCC ATGAGCTCCA CCAAGTCGAT GACAGGTCAT CTTCTGGGTG CCGCGGGGGG GGTCGAAGCC ATTTTTACGG CGCTCGCGCT TTATCACGGC ATTTTGCCGC CCACGATCAA TCTGGATCAG GCCGACGAGG GCTGTGACCT GGATTATGTG CCCCTCAAAG CACGAAAAGC GTCCGTAGAA GTTGCTTTAA GCAATTCCTT TGGATTCGGC GGCACCAATA GTTCTCTGGT TTTCCGCCGC TTCCACGACT GA
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Protein sequence | MKRRVVITGL GIVSPVGVGI PAAWNSITQG RSGIGRVTRL DPASYSSQIA GEVRGFDIGQ YIPIKEARKM DLFIHYGLVA AMEAVADSGL QIGADIADRV GVSIGSGIGG LPGIESEHQV VTESGPRRIS PFFIPRCIVN MVSGHVSIMY GAKGPNIAMA TACSTGTHSI GEAARLIEYG DADVMIAGGA EAAVSPLGLG GFCAARALST RNADPEKASR PWDKDRDGFV LGEGAGVLIL EEYEFARRRG ARIYAELAGY GMSSDAYHMT QPAPGGEGAV RCMQAALRNA SVSPEMVGYI NAHGTSTPLG DRSETDAVHT VFGEHAQRLA MSSTKSMTGH LLGAAGGVEA IFTALALYHG ILPPTINLDQ ADEGCDLDYV PLKARKASVE VALSNSFGFG GTNSSLVFRR FHD
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