Gene AFE_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1898 
Symbolsod 
ID7135419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp1657813 
End bp1658430 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content55% 
IMG OID643530275 
Productsuperoxide dismutase 
Protein accessionYP_002426312 
Protein GI218665031 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAAT ATAGCGTGCG CGAAGAATTG AAGCCCAGCG GCCTGGATGG CATCTCCGAT 
GCCCAAATTA CGGATCACTG GGGCCTTTAT GTAGGTTATG TCAACCAGAG CAATGCGTTG 
CACAAAGAGC TTGCAGAAAT GCGGGCGGCG GGTAAAACCA GTTCCCTCGC CTATGCAGAT 
CGCCGCAGGC GCTTTGGCTT TGAGTATAAC GGCATGGTTT TACATGAGTA TTATTTTGCG 
CAACTGAAGC CGGGCAGCAG TATCGATCAG GCACCCGGCT TCAAGGCAGC GGTCACGGAA 
CAGTTTGGCA GCGCTGAGGT ATGGCACGAA GATCTGGTGT CTGCGGCCAA GAGCCGGAGC 
GTGGGTTGGG CCATCGCTTA TTATGATGGT ACTACCGGTC AGATCAACAA CCACTTCGTT 
CAACTCCACG AAGACGGTAA CGTGGGTGGT TTCGTGCCGC TGGTTATCGT CGATGTCTTC 
GAGCACGCCT ATATGGTGGA CTGGAAGGCA CTTGGCCGCG CGGATTACCT GGCAGCCGTT 
CACAAAAACA TGAACTGGGG CGTGGTGGAA GCGCGCTTCC AGGCAGCCCG AAGTGGTCAG 
ATTTTCAAGC GCTTCTGA
 
Protein sequence
MSEYSVREEL KPSGLDGISD AQITDHWGLY VGYVNQSNAL HKELAEMRAA GKTSSLAYAD 
RRRRFGFEYN GMVLHEYYFA QLKPGSSIDQ APGFKAAVTE QFGSAEVWHE DLVSAAKSRS 
VGWAIAYYDG TTGQINNHFV QLHEDGNVGG FVPLVIVDVF EHAYMVDWKA LGRADYLAAV 
HKNMNWGVVE ARFQAARSGQ IFKRF