| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1878 |
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| Symbol | |
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| ID | 7137296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 1632288 |
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| End bp | 1635368 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643530254 |
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| Product | transporter, AcrB/AcrD/AcrF family |
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| Protein accession | YP_002426292 |
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| Protein GI | 218666930 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTA CGGATATCTT CATTCATCGA CCGGTTCTGG CTACGGCCTT GAGTCTGGTG
ATCCTCCTTC TCGGATTACG GGCTTATACC GAAATGACGG TGCGCGAGTA CCCGGCCATC
ACCAACACCG TGGTTACGGT AACCACGGCC TACCCCGGCG CCAATCCCAA CACCATCCAG
GGCTTCATCA CCACCCGGTT GGAGCGGGTG ATCGCCAGCG CCCCCGGCAT CGACTACATG
ACCTCCAACA GTTCCGAGGG CATGTCCACC ATCACCGTGT ACATGAAACT GAATTACAGC
CCCGACGCGG CGGTGGCCAA TATCCAGTCG AAGGTCCAGC AGGTGACCAA CGAACTGCCC
GCCGGCAGCC AGTTGCCGGT GATCAACGTG ACCGTGGGCA ATACCACGGA TCTCATGTAT
ATCGCCTTTT ACAGCAACCA ATTGAACCAG CAGCAGATTA CCGACTACCT CCTGCGGGTG
GTCCAGCCCA AGCTCGCGGC GGTCAGCGGC GTGGGTCAGG CGCAGATCCT GCCGCCCGGC
TCCGGGAACG GCAATACGTA TTCCATGCGC GTCTGGCTCA ATCCCCGGAA GATGGCAGCC
CTCGGGATCA GCGCGTCCCA GGTATCCCAG ATTCTGGCCG CCAACGACTT CATCTCGGCG
GTAGGGAGCA CCCGGGGGAC CGAGACGGGG GACACTATCG TCGCGACCAC CAACCTCCAT
GACGCGGCGC AGTTCCGCAA CCTCGTGGTC AAAAATGTGG GTAATACCAT CATCCGCCTC
AAGGACATCG CCCAGGTAGA ACTCGGAGCG CAGAATTACG ATTCCAGCGC TTATTTTGAC
GGCAAACCGG CGGCTTTCGT CGGTATTCAG GAGGCACCGT CGGCCAACTC GCTGAATGTC
GCGGCGGGAG TCAAGGCGGC CCTGGCTGAA CTCGGCACTG CCCTTCCGCC GGGCATGCAC
ATGGCCATCC CCTACGACGC AACGGACTAC ATCAAGGCCT CCATCAACGA CGTTCTCATA
ACGATCGGTA TCACGCTGGC AGTGGTGGTT CTGGTGATCT TCCTCTTCCT GGGTTCCTTC
CGTTCGGTGC TCATCCCGGC GGTGGCCATT CCCCTGTCCA TCATCGGTGC CGGCTTCATC
ATGTGGGCCA TGGGCTTCAC CATCAACCTG CTCACCCTGC TCGCCATCGT TCTGGCCATC
GGCCTGGTGG TGGATGACGC CATCATCGTG GTGGAAAACG TGCACCGTCA CATCGACGAG
GGCAAAAGCC CCCTCCAAGC GGCCTTGATG ACTGGTCGGG AGCTGGGTAC CGCCATCGTG
GTGATGTCCA CCACGCTGAT CGCCGTCTTT GCCCCCATCG GCTTCATGAG CGGTCTGACC
GGCAGTCTTT TCAGCGAGTT CGCCTTTACG CTGGTGGCTA CCGTGGTGGT TTCCATGGTG
GTGGCGCTGA CCCTGTCGCC CATGCTCAGC AGCAAGATAC TCCGAGCCAG CAGCGCGCAT
GGATTCGCCC ACTTCATCGA TACCCGCTAC GAGGAACTGC GCCGCCTGTA CGATCGGCTG
CTCCGGGGTA GCCTCAACTT CGTGCCGGTG ACCCTGCTTT TTGCCGCCGT GATATTCGTG
AGCATTTATT TCCTCTTCAC CACGAGCAAA CAGGAACTGG CGCCGCAGGA AGATCAGGGT
ATCATTTTCA ATATGGGTAC GGGCGCGCCC AACATCACCC CGGAACTACT GAGCAAGTAC
GGCATGAAAA TCGTCCATGA CCTGGGCAGG TATCCGGAGA CCAAGGCCGT CTTCATGGTC
ACGGGGATAT CCGTTGGCAG TGGTGGCGGA ACGAACAGTC TCATCGCCGG CATGCGGCTG
AAAAACTGGG ACAAGCGATC GGTAACCGCC ATGCAGTTGG CGCCCCAGGT ACAACAGCAA
ATGAACGGGA TCACCGGTCT GCAGGTGGCG TCGTTCCAAC CGCCGTCCCT GCCAGGGTCC
GCCGGGGGGC TGCCGGTTCA ATTCGTGCTG CAGTCGAGTG GAGGTTACGA CAAGCTGGAC
CAGGTGGCCA ACGATGTCAT CGACCGCGCC CAGAAAAGCG GCCTGTTCGT CTACGTGACC
AAGGATCTGC GCATCGACAA TCCGGAAATC GTCCTTCACA TCCATCGCAA TATGGCCGCC
AACCTCGGCT TGACCATGGC GAATATCGCG CAGGATCTGC AACCGCTGCT TGGCGGCAAT
TACGTCAATC GATTTGATCT GAAAGGCCGG AGCTATGAAG TGATCCCGCA GGTGCCGGAC
CACTTCCGCG CCAACCCAGG CATGCTCAAG ACCTACTACG TAGCTACTGC AACGGGGCAG
ATGGTGCCGC TATCCACCCT GGTGTCGGTG GAAACGGAGG TGCAACCGCA GTTTCTGCCG
CAGTTCCAGC AGCTCAATTC CGCCACCATT CAGGCGGTGC CCGCCCCCGG TGTGACCCTC
GGCCAAGCAT TGGCTTATCT GAAAACCCAG GCCCAGAACA TTATGCCCAA GGGCTTCTCC
ATCGACTACT CCAGCCAGTC GCGGCAGTAT ATGCAGGAGA AAAGCGGGCT GCTGGTTACC
TTTGCCTTGG CCATCCTCCT CATTTATCTG CTCCTCGCCG CGCAATTCGA GAGCTTTCGC
GATCCGCTCA TCGTGCTCAT CACGGTGCCT ATGTCCATCA GCGGGGCGCT GATCTTCATC
AGTCTGGGGC TGGCCACCAT CAACATCTAC ACCGAAGTGG GCCTCATTAC TCTCATTGGC
CTCATCGCCA AGCAAGGCAT CCTCATCGTC CAGTTCGCCA ACCAGATCCA GCGACACGAA
GGGCTGGACA AGCGCTCCGC CGTGGAAAAA GCCTCCAGCA TCCGCCTGCG GCCCATTCTC
ATGACCACCG GTGCGATGGT GCTGGGCGTA TTGCCCCTCT TGCTGGCGAG TGGAGCCGGG
GCGGTCAGCC GCTTCGACAT GGGTCTGGTA ATCTTTACCG GGCTGGCTAT CGGGTCTTTT
TTCTCGCTCT TCGTTGTGCC AGCCATCTAT ATGATACTCG CCAAGGATTT ACGGGAACCT
CAAAATTCCC GGGAAGCCTG A
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| Protein sequence | MKFTDIFIHR PVLATALSLV ILLLGLRAYT EMTVREYPAI TNTVVTVTTA YPGANPNTIQ
GFITTRLERV IASAPGIDYM TSNSSEGMST ITVYMKLNYS PDAAVANIQS KVQQVTNELP
AGSQLPVINV TVGNTTDLMY IAFYSNQLNQ QQITDYLLRV VQPKLAAVSG VGQAQILPPG
SGNGNTYSMR VWLNPRKMAA LGISASQVSQ ILAANDFISA VGSTRGTETG DTIVATTNLH
DAAQFRNLVV KNVGNTIIRL KDIAQVELGA QNYDSSAYFD GKPAAFVGIQ EAPSANSLNV
AAGVKAALAE LGTALPPGMH MAIPYDATDY IKASINDVLI TIGITLAVVV LVIFLFLGSF
RSVLIPAVAI PLSIIGAGFI MWAMGFTINL LTLLAIVLAI GLVVDDAIIV VENVHRHIDE
GKSPLQAALM TGRELGTAIV VMSTTLIAVF APIGFMSGLT GSLFSEFAFT LVATVVVSMV
VALTLSPMLS SKILRASSAH GFAHFIDTRY EELRRLYDRL LRGSLNFVPV TLLFAAVIFV
SIYFLFTTSK QELAPQEDQG IIFNMGTGAP NITPELLSKY GMKIVHDLGR YPETKAVFMV
TGISVGSGGG TNSLIAGMRL KNWDKRSVTA MQLAPQVQQQ MNGITGLQVA SFQPPSLPGS
AGGLPVQFVL QSSGGYDKLD QVANDVIDRA QKSGLFVYVT KDLRIDNPEI VLHIHRNMAA
NLGLTMANIA QDLQPLLGGN YVNRFDLKGR SYEVIPQVPD HFRANPGMLK TYYVATATGQ
MVPLSTLVSV ETEVQPQFLP QFQQLNSATI QAVPAPGVTL GQALAYLKTQ AQNIMPKGFS
IDYSSQSRQY MQEKSGLLVT FALAILLIYL LLAAQFESFR DPLIVLITVP MSISGALIFI
SLGLATINIY TEVGLITLIG LIAKQGILIV QFANQIQRHE GLDKRSAVEK ASSIRLRPIL
MTTGAMVLGV LPLLLASGAG AVSRFDMGLV IFTGLAIGSF FSLFVVPAIY MILAKDLREP
QNSREA
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