| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1871 |
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| Symbol | |
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| ID | 7135599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1620264 |
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| End bp | 1623311 |
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| Gene Length | 3048 bp |
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| Protein Length | 1015 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643530247 |
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| Product | DNA polymerase III, alpha subunit, putative |
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| Protein accession | YP_002426285 |
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| Protein GI | 218667676 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCTGAGT ACGCCGAGCT CCACTGTCTC AGCGCACTGA GTTTTTTACG GGGTGCCAGT
GCCGTGGAAG ACCTGCTGGA CCGTGCCCAG GCGCTGGGAT ACCGTGCCCT CGCCATTACC
GAGGAGTGTT CCCTGGGCAG CGCGGCGCGA GCCCACAGCC ATGCCTGCAA TATCGGTTTT
CCGCTGATAC TGGGCAGTGA AATCGCCCTG ACCGATGGTC CGCGCATCGT CCTGCTGGTG
CAGGAGCATG ACGGTTATGT CGCGCTATCC CGCTTCATCA CCCGCGCCCG GGGGCGGGCG
GGAAAAGGCC ATTATCAGGC CCGCATGGCG GATTTGCCGG AACTTGTGGG TTGTCTGGCC
ATCATTCTCC CTGATTCGCA AAGCCTGCGC TTCGATGTTG CCGGCGCCAT CGCCGTAAGG
GATTGTCTTG GCGCCGAAAA TGTCTGGCTG GGCGCGGAGC TCCTGCGTGG CGGCGATGAC
GCGGCGCAAC TTCGGGAGGT GTTGGAGCAG GGCAGGGCGC TGAATATTCC TTGTCTGGCT
TGCGGGGATG TCCACATGGA CCGGCGCAGC CGTCGTTTTT TGCAGGATGT GCTCACTGCC
ATCCGCCTGC GGCGTCCGCT GGCAGATCTG GGCTGGGCAC TGGCCCGTAA TGGCGAGCGC
CACCTGCGCC CGCGCTCCGT ACTGGCGGAG ATCTATCCTC CGGAGCTGCT GGTCGAAACC
TTGCGGGTGG CAGAGCGCTG TCAATTTTCT CTCGATAGTC TCGTTTATCG CTACCCCGAT
GGGGCCTGTC CCGCAGACCA GCAGCGAGAT GATTATCTCG CCGAACTGGC CAGGCAAGGT
CTGCAACGGC GTTATCCCCA AGGTGTCGCC ACGGTGGTAG CCACGCAACT GGAGGCGGAA
CTGGCACTGG TGCGGGAACT GGATTACGCC GGCTATTTCC TGACCGTCCA CGATATCGTC
CGATTTGCCA AGGGGCGCGG TATCCTCTGC CAGGGCCGGG GCTCGGCGGC CAATTCGGTC
ATTTGCTATG CCCTCGGCAT TACGGAAGTA GACCCCAGCC GAATGCAACT GCTTTTCGCG
CGATTCATTT CCCGCGATCG TCGGGAGCCG CCGGATATTG ACGTGGATTT CGAGCATGAG
CGCCGCGAAG AAGTCATTCA GTACGTGTTT CAGCATTACG GGCGGGACCA CGCCGCGCTG
ACCGCTACCA TCATCCATTA TCGGCCGCGC AGTGCCATGC GCGATGCCGC CCGTGCCCTT
GGTTTTGCGC CGGTCGAGAT TCAGCGCCTC ACCCAGGGCC TGGCTTGGTG GGATGGACGC
CAAATTCGCC CGGAGCGTTT GCAGGAGCAG GGCTTCGACC CTACCAGCCC GACCATCCAA
CGCCTGGTCA CCGTAGTCAA TGCACTGGTC GGTTTCCCGC GTCATCTCTC CCAGCATGTC
GGTGGCATGG TGCTCTCTGC GACCCCCCTC AATGCCTTAG TTCCCATCGA ACCCGCCGCC
ATGGCGGAGC GCGCGGTGAT TCAGTGGGAC AAGGACGATC TCGACGTCCT TGGTATCCTC
AAGGTCGATA TACTCGCGCT GGGGATGCTG AGCGTGTTGC GCCGTGCCCT CGATGATCTG
GGCATGACCC TCGCCGACAT CCCTGCCGAA GACCCGGCCA CCTACGCCAT GCTCCAGCGC
GGTGAGAGCC TGGGCGTCTT TCAGGTGGAG TCGCGGGCGC AGATGAGTAT GTTGCCGCGC
CTCAAACCCC GTTGTTTTTA CGACCTGGTG ATCGAAGTCG CCATCATCCG CCCCGGCCCT
ATCCAGGGCG ATATGGTGCA TCCCTATCTG CGTCGCCGCC AGGGGCTGGA GCCGGTGCGC
TATCCTGGAC CGGAAGTCAA AAAGGTGCTG GAACGGACCC TGGGTGTGCC GATTTTTCAG
GAGCAGGTGA TGCAGATTGC CATCGATGCT GCGGGTTTCA GTGGTGACGA GGCTGATGGT
CTGCGCCGGG CCATGGCCGC CTGGCGGCGC AAGGGGCATC TCGGCCCTTA CAGCGACCGC
CTCATCCGCG GTCTCCGTCT GCGCGGCTAT TCCGAAGCAT TCGCCCAGCG TCTTTGCCAG
CAGATTCAGG GCTTCGCCGA ATATGGTTTT CCCGAATCCC ATGCCGCAAG CTTCGCCCTG
CTGGTTTATG CCTCCGCCTG GATCAAGTGC CACCATCCGG CCATATTCGC CGCCGCGCTA
TTGAACAGCC AGCCCATGGG TTTTTATGCC CCCGCCCAGA TCGTGCAGGA GGCCCGCCGC
TGTGGCGTTG AGGTATTGTC CGTGGACATC TGCCATAGTG ACTGGGATTG TAAGGTACAG
GATGGGGCGC TGCGTCTGGG GCTTTGCCTG ATCAAGGGCA TGTCTCCCAA AGAGGCGGAA
AGGCTTCTGC ACTGGCGGGC GCAGGGCGGT GCGCTGCACA GCGAGGCGCT TCGCCATGGC
CTTGGTCTGT CCGCTGCCGC GCTGCACCAA CTGGCATATG CCGGGGCCCT GTCCAGCCTG
CACGGGGACC GACATCAGGC CCTGTGGGCG GTGCAGGGCA GCCTGCCCCT GCCCACCGCA
TTGCCCATGC CGGTGGTACC AGAGCAGGCT CCCGCCCTTC CTGCCGAAAC GTCCGCTGCC
GCCTGTATTG CCGATTATCA GCAACTGGGC CTGAGCCTTG GTCCCCATCC TCTGCATTTT
CTGCGCGAGC GGATCGCCCA AAGTGGCTAT CGCCGTATCG CCGAGGTGCG CCTGCAGCAC
CACGACCGCC CGGATCGTCT CGCCGGTCTG GTCACCCACC GGCAGCGTCC CGGTACAGCC
CATGGTACGG TATTCCTGAC ACTGGAAGAT GAGTCCGGTA TGATCAATGT CATTGTCTGG
CCGCAAAGGG TCGAAGGCTG GCGCCGGGCA CTGCTGCAGG GCCGCCTGCT GGGTATCGGC
GGTCGGCTGG AGCGCCAGGG TGTCAGTCTT CATTTTATCG CCGACGCCAT GGAGGATCTC
AGCCCCTGGC TGGGTACACT GAGCACACGC TCCCGGGATT TTTATTAG
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| Protein sequence | MPEYAELHCL SALSFLRGAS AVEDLLDRAQ ALGYRALAIT EECSLGSAAR AHSHACNIGF
PLILGSEIAL TDGPRIVLLV QEHDGYVALS RFITRARGRA GKGHYQARMA DLPELVGCLA
IILPDSQSLR FDVAGAIAVR DCLGAENVWL GAELLRGGDD AAQLREVLEQ GRALNIPCLA
CGDVHMDRRS RRFLQDVLTA IRLRRPLADL GWALARNGER HLRPRSVLAE IYPPELLVET
LRVAERCQFS LDSLVYRYPD GACPADQQRD DYLAELARQG LQRRYPQGVA TVVATQLEAE
LALVRELDYA GYFLTVHDIV RFAKGRGILC QGRGSAANSV ICYALGITEV DPSRMQLLFA
RFISRDRREP PDIDVDFEHE RREEVIQYVF QHYGRDHAAL TATIIHYRPR SAMRDAARAL
GFAPVEIQRL TQGLAWWDGR QIRPERLQEQ GFDPTSPTIQ RLVTVVNALV GFPRHLSQHV
GGMVLSATPL NALVPIEPAA MAERAVIQWD KDDLDVLGIL KVDILALGML SVLRRALDDL
GMTLADIPAE DPATYAMLQR GESLGVFQVE SRAQMSMLPR LKPRCFYDLV IEVAIIRPGP
IQGDMVHPYL RRRQGLEPVR YPGPEVKKVL ERTLGVPIFQ EQVMQIAIDA AGFSGDEADG
LRRAMAAWRR KGHLGPYSDR LIRGLRLRGY SEAFAQRLCQ QIQGFAEYGF PESHAASFAL
LVYASAWIKC HHPAIFAAAL LNSQPMGFYA PAQIVQEARR CGVEVLSVDI CHSDWDCKVQ
DGALRLGLCL IKGMSPKEAE RLLHWRAQGG ALHSEALRHG LGLSAAALHQ LAYAGALSSL
HGDRHQALWA VQGSLPLPTA LPMPVVPEQA PALPAETSAA ACIADYQQLG LSLGPHPLHF
LRERIAQSGY RRIAEVRLQH HDRPDRLAGL VTHRQRPGTA HGTVFLTLED ESGMINVIVW
PQRVEGWRRA LLQGRLLGIG GRLERQGVSL HFIADAMEDL SPWLGTLSTR SRDFY
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