Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1848 |
Symbol | |
ID | 7137309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1605780 |
End bp | 1606748 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643530226 |
Product | base excision repair protein, HhH-GPD family |
Protein accession | YP_002426264 |
Protein GI | 218666609 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATACT ACTTCCGCCT CAGCCCGCGA CCGCCCTTTC GTTTGGATCT CACGGTCTGG GCGCTGCGCC GTCAAGCCCA TAACAGGATG GATGGCTGGG AGAGCGAAAC CTATCGGCGC GTCTGGCGCT ATGGGGACGA CTGGCTGAAA GTCCGGCTCT GGCAGACGAA GGGCGATCCC GATCCGTTTC TGGAAGGAGA AATCTACGAA GGCCCCCAGG ACGAGCGGAC CGTCTCCTGG GTCCGCGCGC AACTCACCTG GATGCTAAGC CTGGATCGGG ATCTTGGCCC CTTTTACGTG GTAGCCGCTG GAGATCCTCG TCTCGCGTCC TTGGAGGCGC GCTACCGAGG CCTCCGACCA CCCCGTTTCC CATCCCTCTT CGAGGGCATG GTCAATGCCG TCGCCTGCCA GCAACTGAGT CTGCATCTGG GTATCACTCT CCTCAACCGA CTCTCGGAGC TCTGCAGGGA GGGGGTGGGA GAAATGGACC AGGTGTACCC TTTTCCGGAT CCTGGCTCTC TGCTGCGGCA GGAGGTGACG GCCCTGCGTG GTCTAGGCTT CAGCGGCCAG AAGGTGACCG CCTTGCGCGC GCTGGCGGAA GAAGCGGCGG TCGGCGGACT GGAGCGTGAA GACTGGCAGC ATTTGCCCAA CGCCGCAGCC GTGCAGCGTC TGCTGCGTTT GCGCGGCATC GGCCGCTGGT CGGCGGAGTA CGTCCTGCTG CGCACCCTGG GGCGTCTGGA CGTTTTCCCC GGTGACGACG TGGGGGCGCG CAAGGCCCTG GCCCGCTGGC TGGAGGAAAA CGGCAGCTTG GATTATGCCC AGGTCGCCCA CCGGCTCCGG CCATGGCAGC CCTACGCCGG CATGGTATAT TTTCTGTTGT TGATGCGGCG ACTGGAAGGC GAGGGCCGTA TGTGGAACCC CGGCGATGAA CTGCCGCTGT CCCAATCGGA TCAGGCGGAC AGGCGGTAA
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Protein sequence | MGYYFRLSPR PPFRLDLTVW ALRRQAHNRM DGWESETYRR VWRYGDDWLK VRLWQTKGDP DPFLEGEIYE GPQDERTVSW VRAQLTWMLS LDRDLGPFYV VAAGDPRLAS LEARYRGLRP PRFPSLFEGM VNAVACQQLS LHLGITLLNR LSELCREGVG EMDQVYPFPD PGSLLRQEVT ALRGLGFSGQ KVTALRALAE EAAVGGLERE DWQHLPNAAA VQRLLRLRGI GRWSAEYVLL RTLGRLDVFP GDDVGARKAL ARWLEENGSL DYAQVAHRLR PWQPYAGMVY FLLLMRRLEG EGRMWNPGDE LPLSQSDQAD RR
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